Castor canadensis (American beaver): 109684633
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Entry
109684633 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04360
Axon guidance
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109684633
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109684633
05022 Pathways of neurodegeneration - multiple diseases
109684633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccan04040
]
109684633
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109684633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
109684633
NCBI-ProteinID:
XP_020016692
UniProt:
A0A8B7UBQ1
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MEGSPSLRRMTVMREKGRRQAARGPAFMFNDRGMSLTAEEERFLDAAEYGNIPVVRKMLE
ESKKLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGXVRIVEA
ILNHPGFAASKRLTLSPCEQDLQDDDFYGYDEDGTRFSPCITPIILAAHCQKYEVVHMLL
LKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDQVLNALE
LSNELAKLANIEKEFKNDYRKLSMQCKGFVVGVLDLCQDSEEVEAILNGDLESMEPLEVH
RHKASLSHIKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLQEQTTAIKCLVVLVVAXGL
PFLTIGYWIAPYWLLGKILQSPFMKFVAHTASFIIFLGLLVFNASDRFEGIATLPNITVI
DYPKQIFRVKTTQFTWTEMLIMVWVLGKDKWLPSDPQIIFEAFMAIAVVLSFSRITYILP
ANESFSPLQDLSGKDCEDNSSSWSLSYMVFWPLLMANVHTYSYYLGAKSQFLLYHIKESF
KTLFSSIFGLSEVTSIVLKYDHKFIENMNMV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaagcccgtccctgaggcgcatgacggtgatgcgggagaagggccggcgacag
gccgcccgaggtccggccttcatgttcaatgaccggggcatgagcctcacagcagaggag
gagcgcttcctggacgctgccgagtacggcaacatccccgtggtgcgcaagatgctggag
gagtccaagaagctcaacgtcaactgcgtggactacatgggccagaacgcgctgcagctg
gccgtgggcaatgagcacctggaggtgaccgagctcctgctcaaaaaggagaacctggcg
cgcatcggcgacgccctgctgctggccatcagtaagggctaagtgcgcatcgtggaggcc
atcctcaaccacccgggcttcgcggccagcaagcgcctaaccctgagcccctgtgagcag
gacctgcaggacgacgacttctacggctacgacgaggacggtacgcgcttctcgccctgc
atcaccccaatcatcctggctgcgcactgccagaagtacgaggtggtacacatgctgctg
ctgaagggcgccaggatcgagcgcccgcacgactatttctgcaaatgcggggactgcacg
gagaaacagagacacgactccttcagccactcccgctccaggatcaacgcctacaagggg
ctagccagccctgcttacctgtccttgtccagcgaggaccaggtgctcaacgccctggag
ctcagcaacgaactggccaaactggccaacatagagaaggagttcaagaatgactacagg
aagctctccatgcaatgcaaaggctttgttgtgggtgtactcgatctgtgccaggactca
gaggaggtggaagccattctgaatggagatctagaatccatggagcctctggaggtgcac
aggcataaagcttcattgagtcacatcaaacttgctattaagtatgaagtcaaaaagttt
gtagctcaccccaactgccagcagcagcttttgaccatctggtatgagaacctctcagga
ctgcaggaacagactacagccatcaagtgtctggttgtgctggtggtggccntgggtctt
ccattcctcaccatcggctactggattgcaccttactggctcctggggaaaattctgcaa
agcccttttatgaagtttgtggcacacactgcttctttcatcatcttcctgggcttgctt
gtgttcaatgcctcagacaggtttgaaggcatcgccacactgccaaatatcactgtcatt
gactaccccaaacagatcttcagggtgaaaactacccagttcacatggactgaaatgcta
attatggtctgggttcttggtaaagataaatggctcccttctgaccctcagatcatattt
gaagcctttatggccatcgctgttgtgctcagcttctctcggatcacgtacatcctccct
gccaatgagagcttcagccctttgcaagatctctctgggaaggactgtgaagacaattca
agttcatggtctctttcatatatggttttctggcctttattgatggccaatgttcatact
tattcttactaccttggggccaaaagtcaattcctgctttaccacataaaagaaagtttc
aagactttgttttcatcaatatttgggttgtctgaagtgacttccattgtgctcaaatat
gatcacaaattcatagagaacatgaatatggtttag
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