Castor canadensis (American beaver): 109688188
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Entry
109688188 CDS
T04791
Symbol
Smcr8
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04140
Autophagy - animal
ccan05014
Amyotrophic lateral sclerosis
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109688188 (Smcr8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109688188 (Smcr8)
05022 Pathways of neurodegeneration - multiple diseases
109688188 (Smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109688188 (Smcr8)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109688188 (Smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
eRF1_1
Motif
Other DBs
NCBI-GeneID:
109688188
NCBI-ProteinID:
XP_020022067
UniProt:
A0A250YLW0
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNERALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKVNDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKVKGSDLFLDEMEHTQDETNQALTTSNPDESADTDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDFVEVDDRMVEKQENEPSQPSQDKLPSRSLEEFPIPKVLISVGSYKS
SVESVLIKMEQEVGEEEYKEVEVTESSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKS
TSVLSNSDSQASLTVPLSPQVIRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEESYADNEEAIRFLASIRPPELGDAQEDSLENTPSQADSSCCIGKDSEGQLVSLPTAA
HTLSDEVGVVSIPPQRYRQKDQEFLVDFVAENANPSSRDNSCEVLPAYELDPNRLLASRD
VSKTSLDNYSDTSYVSSLASTSSDRIPSAHTAGQSSERHKKKAGLNALKFIRQYPFAHPA
IYSLLSGRTLVVLGEDETIVRKLVTALSIFVPNYGRYAKPVKHWVSSPLHIMDFQKWKLI
GLQRVASPASAGTLHALSRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQIKRGSTY
YLHVQSMLTQLCSKAFLYTFCHHLHLPAHDKETQELVASRQASFLKLNLGLVNEDVRVVQ
YLAELLKLYYMQESPGTSHHLLRFDYVPSFLYKI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcactaaagaagacgagtacgaggaagaacct
tacaatgagcgggccctgcccgaggagtattcggtgccgctcttcccctttgccagccag
ggagccaacccttggtctaaactgtccggggccaagttctcgagagacttcatacttatt
tctgagttctctgagcaggtgggaccccagcctttgctaaccatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctcccttcggatcatgtctgtggattaccag
gcttcctttgtgggccatcctcctggttctgcctaccccaagctgaacttcgtggaggat
tccaaggtagtgctgggagattctaaggaaggggcctttgcatatgtgcaccaccttacc
ctgtatgacctggaggcccgtggctttgtgagacccttttgcatggcttatatatcagca
gaccagcataaaattatgcagcaattccaggagctctcagccgaattctcaaaagcatct
gagtgcttgaagacaggcaacaggaaggcatttgctggggaacttgaaaaaaagctaaaa
gacttggattacactaggacagtgctgcacacagaaacagagatccagaagaaagtcaac
gacaaaggcttttactcatctcaggcaattgagaaagctaatgaactggccagtgtggag
aagtccattattgaacatcaagacttgcttaagcagatccgctcataccctcatcggaag
gtgaaggggtctgatttgtttcttgatgagatggagcatacccaggatgagaccaaccaa
gcactcactacctctaaccctgatgagtctgctgacacagacctttacacctgcagacca
gcttacactccaaaactcatcaaagcaaagtctaccaagtgttttgacaagaagttgaag
accctggaggagctctgtgacactgagtatttcacccagaccctggcgcagcttagccac
atagagcacatgttcagaggagacctgtgctatctactgaccagtcagattgacagagca
cttctaaaacaacagcacataacaaacttcctctttgaagactttgtggaggttgatgac
aggatggtggagaaacaagagaatgagccctctcagcccagtcaggataagctgccttcc
aggtctctagaagaatttcccattcctaaagtgttaattagtgttggttcttataagtcc
agtgtggagtctgtgttgatcaagatggagcaggaagttggagaagaggagtacaaagaa
gtggaagtgacagagtcaagcagttttgacccccaggaaaacctggactacctggatatg
gatatgaaagggagtatcagcagtggggaaagcattgaggttctgggcacagagaagtcc
acctctgtgctgtctaactctgacagccaggccagtctcactgtgccattgagcccccag
gtgatccggagcaaggctgtcagccacaggaccatcagtgaggacagtattgaagtcctg
agcacctgtccttctgaggccctcatccctgatgactttaaggccagctacccaagtgcc
attaatgaagaatcctatgcagataatgaagaggccatccgctttctggcaagcatcaga
ccaccagaactgggtgatgctcaggaggacagcttggaaaacactccatcacaagcagac
tcctcctgctgtattgggaaggacagcgaaggtcaactggtgtcactgcccactgcagcc
cacactctttctgatgaggttggtgtggtgagcattcccccacagcgctacaggcagaag
gaccaggagttccttgtggattttgtagcagaaaatgccaacccttcttcccgagacaac
agttgtgaagtgctcccagcttatgagctggacccaaaccgcctgctggctagtcgggat
gtcagtaagaccagcctggacaactactcagacaccagctacgtgagcagtctagcctcc
accagctcagacaggatcccctctgctcatactgctggtcagtcttctgagagacataaa
aagaaggctggcctgaacgccttaaaattcattcgtcagtacccctttgcccacccggcc
atctactccctgctcagtgggaggacacttgtggtcctgggggaagatgagaccatagtc
aggaagcttgtgacagccctgtcaatctttgttcccaactatggccgttatgccaagcct
gtgaagcactgggtctcctcccctttgcacattatggattttcagaagtggaagcttatt
ggcctacagagagtggcctcccctgccagcgcgggcaccctccatgccctgagccgctat
agccgctacacgagcatcctagacctggacaacaaaaccctgcgctgcccactgtacagg
ggcacactggtgccccgtctggccgaccaccgcacgcagatcaagcggggcagcacctac
tatctgcatgtccagagcatgctcacccagctctgctccaaggctttcctctacaccttt
tgccaccacctgcacctgcctgcccatgacaaggagacacaggaattggtggctagccgc
caggccagcttcctgaagttgaacctgggcctggtgaatgaggatgtcagggttgttcag
tacctggctgagcttctgaagctgtactacatgcaggagtctcctgggaccagccaccac
ctgctcaggtttgactatgtccccagctttttgtacaaaatctga
DBGET
integrated database retrieval system
