Castor canadensis (American beaver): 109692527
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Entry
109692527 CDS
T04791
Symbol
Ldlr
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03272
Virion - Hepatitis viruses
ccan04144
Endocytosis
ccan04913
Ovarian steroidogenesis
ccan04925
Aldosterone synthesis and secretion
ccan04927
Cortisol synthesis and secretion
ccan04934
Cushing syndrome
ccan04976
Bile secretion
ccan04979
Cholesterol metabolism
ccan05145
Toxoplasmosis
ccan05160
Hepatitis C
ccan05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109692527 (Ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109692527 (Ldlr)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
109692527 (Ldlr)
04925 Aldosterone synthesis and secretion
109692527 (Ldlr)
04927 Cortisol synthesis and secretion
109692527 (Ldlr)
09154 Digestive system
04976 Bile secretion
109692527 (Ldlr)
04979 Cholesterol metabolism
109692527 (Ldlr)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
109692527 (Ldlr)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
109692527 (Ldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109692527 (Ldlr)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
109692527 (Ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109692527 (Ldlr)
Membrane trafficking [BR:
ccan04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109692527 (Ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF
EGF_3
Psg1
hEGF
Motif
Other DBs
NCBI-GeneID:
109692527
NCBI-ProteinID:
XP_020028773
UniProt:
A0A8B7VAP2
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MRTSHQGLLWAAALLLTAAGAAAEDRCSRNEFQCRDGKCISNKWICDGSSECQDGSDESQ
ETCMSVTCKPEDFSCGGRVNRCIPNSWRCDGQMDCENGSDEQGCHLKTCSQDEFRCQDGK
CIAQHFVCDRDRDCLDGSDEASCPVTTCGPASFQCNSSVCIPELWACDHDPDCEDGSDEW
PQYCGDHDTSQGNQGPCSSLEFHCHSGECIHISWRCDGGPDCKDKSDEENCAVATCRPDE
FQCTDGTCIHGSQQCDREYDCKDMSDELGCINVTLCEGPNKFKCHSGECITMDKVCNSVR
DCRDWSDEPIKECVTNKCLDNNGGCSHVCNDLKIGHQCLCPDGFQLVDQRRCEDIDECQE
PNTCSQLCVNLEGSYKCECEKGFQMDPRTRVCKAVGSIAYLFFTNRHEVRKMTLDRSEYI
SLIPNLKNVVALDTEVATNRIYWSDLSHRKIYSTQIDRVPSMFSYDTVIGTNLQAPDGLA
VDWIHGHIYWTDSILGTVSVADTKGEKRRTLVQEKGSKPRAIVVDPVHGFMYWTDWGTPA
KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILE
DEKRLAHPFSLAIFEDKVFWTDIINEAIFSANRLTGSDINLVAENLLSPEDIVLFHNITQ
PRGVNWCERTALPNGGCHYLCLPAPQINAHSPKFTCACPDGMLLAKDLRSCVTEAEPVLT
TQKPSTVKPMVSVTPVGTKHKDTQSASSTSWQPTATPGFTTAELVTMSHQVQGDFASRGN
KEKQPQRVGALTIVLPILLIVLCFGAFLLWKNWRXRNINSINFDNPVYQKTTEDEVHICH
SQDGYTYPSRQMVSLEDDVA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaggacttctcaccaggggctgctgtgggccgctgccctgctcctcactgctgctggg
gctgcagcagaagacaggtgtagccggaatgagtttcagtgtcgggatgggaaatgcatc
tccaacaagtggatttgtgatggcagctccgagtgccaggacggctctgatgaatcccag
gagacatgcatgtctgtcacctgcaaaccagaggacttcagctgtggaggccgtgtaaac
cgctgtattcctaactcctggagatgtgacggccaaatggactgtgagaatggctcagat
gagcaaggctgtcacctcaagacctgctcccaggacgagttccgctgccaagacgggaag
tgcattgctcagcacttcgtctgtgacagggaccgggactgcctggatggatccgatgag
gcctcctgcccggtgaccacctgtggccctgccagtttccagtgcaactcctccgtctgc
atcccggagctgtgggcctgcgaccatgaccctgactgtgaggacggctctgatgagtgg
ccacagtactgtggggaccacgacacatcccaagggaaccaaggcccctgctcgtcactt
gagttccactgtcacagtggagaatgtatacacatcagctggcgctgtgacggcggcccc
gactgcaaagacaaatccgatgaggagaactgcgccgtggccacctgccgccctgatgag
ttccagtgcacagatgggacctgtatccacggcagccagcaatgtgaccgagaatatgac
tgcaaggacatgagtgacgaacttggttgtatcaacgtgacactctgtgaagggcccaac
aagttcaagtgccacagtggggaatgcatcaccatggacaaagtttgcaactcagtcagg
gactgccgggactggtcggatgagcccatcaaggagtgtgtcaccaataaatgcttggac
aacaatgggggatgttcccacgtgtgcaatgacctcaagatcggccaccaatgcttgtgc
cccgacggcttccagctggtggaccagcgcagatgtgaagatatcgacgagtgtcaggag
cccaacacctgcagccagctctgtgtgaacctggagggcagctacaagtgcgagtgtgag
aagggcttccagatggacccccgcaccagggtctgcaaggctgtgggttccatcgcctac
ctcttctttaccaaccgccatgaggtcaggaagatgacgctagaccgcagcgagtacatc
agcctcatcccaaacttgaagaacgtggttgctctggacactgaggtggccaccaacaga
atttactggtccgacctgtcccacaggaagatctacagcacccagatcgacagagtcccc
agcatgttctcctacgacactgtcatcggcacgaacctgcaggccccggatgggctagct
gtggactggatccacggccatatctactggaccgattccatcctgggtaccgtatccgtg
gctgacaccaagggtgagaagaggaggacgctggtccaggagaaagggtctaagccgagg
gccattgtggtggaccccgtgcacggcttcatgtactggacagactgggggacccctgcc
aagattgagaaagggggcctgaatggtgtggatgtctactcattggtgacagaagacatc
cagtggcccaatggcatcaccctggatctttccagtggccgcctctactgggttgactcc
aaactccactccatctctagcatcgatgtgaacggtggcaatcggaagaccattttagag
gatgagaagcggctggcccaccccttctccttggccatctttgaggacaaagtattttgg
acggacatcatcaacgaagccattttcagtgctaaccgcctcacaggctcggacattaat
ttagtggctgaaaacctgttgtccccagaagacattgtcctgttccacaacatcacgcag
ccgagaggggtgaactggtgtgagaggacagccctccccaatggtggctgccactaccta
tgcctgccagccccacagatcaacgcgcactcccccaagttcacctgcgcctgcccagac
ggcatgcttctggccaaggatttaaggagctgcgtcacagaggctgagcctgtgctgacc
acccagaagccatctaccgtcaagcccatggtcagtgtgacaccagtggggacaaagcac
aaggacacccagtcagcttccagcacctcctggcaacctacggccacccctgggttcacc
acagcagagttggtgacaatgtcccaccaagtccagggtgactttgccagcagagggaac
aaggagaagcagccacagagagtgggggctctgaccatcgtccttcccatcttgctgatt
gtcctgtgtttcggggccttcctgctatggaagaactggcggntgagaaacatcaacagc
atcaactttgataaccccgtgtaccagaagaccacggaggatgaggttcacatctgccac
agccaggacggctacacctacccctcgagacagatggtcagcttggaggatgatgtggct
tga
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