KEGG   Castor canadensis (American beaver): 109692930
Entry
109692930         CDS       T04791                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03250  Viral life cycle - HIV-1
ccan05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109692930
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    109692930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109692930
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109692930
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC1 APOBEC4 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam DUF7136
Other DBs
NCBI-GeneID: 109692930
NCBI-ProteinID: XP_020029490
UniProt: A0A250YHR8
LinkDB
Position
Unknown
AA seq 410 aa
MPLQLPGPRTNLRPACQSCLEQSPHIRKRLEKLYKEIFYFNFKNLFYATGRHNTFLCYQV
KRTQHGLTNPLDRGVFTKQYYSRTCLHAEQCFLYWFHEHMLDPAEDYQVTWYISWSPCST
CADEMASFLATHRNVSLTIFSARLYYFWNSAYQNGLRKLYQEGAQVKVMTFQEFEDCWEN
FVYNKGESFMPWKGLSRNNRFLKNELKKILGSPMSLLKEDIFLYQFNNQQQVQKPYFRRR
TYLCYQLEQPNGSRPQWPAKGCLQNKKGHHAEIRFIKRIHSMGLEQDQDYQITCYITWSP
CLACACALAELKNHFPRLTLRIFASRLYFHWIRKFQMGLQHLYKSGVLVAVMSLPEFTDC
WEKFVNHRQVFFTPWDKLEEHSRSIQRRLRRILQSWDVDDLTDDFRNLRL
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgccactccagctgccgggaccaagaacaaatctgagaccagcctgtcaaagttgcctg
gaacagtccccacacatcagaaagcgccttgagaagttatataaagaaatattctacttc
aactttaaaaacctattttatgccactggtcgtcacaacaccttcctgtgctaccaagta
aaaagaacacagcacggcttaaccaaccccctggaccgtggggtctttacaaaacagtac
tactccaggacatgtctccacgcagagcagtgcttcctctactggttccacgagcacatg
ctggaccccgcggaggactaccaggtcacctggtatatatcctggagcccctgctctacg
tgtgcagacgagatggccagcttcctggccactcaccgcaacgtgagcctcaccatcttc
tccgcccgcctctactacttctggaactccgcgtaccagaatgggcttcgcaagctgtat
caggaaggggcccaggtgaaggtcatgaccttccaagaatttgaagactgttgggaaaac
tttgtgtacaacaagggagagtcattcatgccatggaaaggactatctagaaataatagg
ttcctgaaaaatgaactgaagaagattcttggaagcccgatgagtctgctgaaggaagac
atattcctctaccagtttaacaaccagcagcaggtccagaagccctacttccgcaggagg
acctacctgtgctaccagctggagcagcccaatggctcccggccacagtggcctgccaaa
ggctgccttcaaaacaagaagggtcaccatgcagaaattcgctttattaagaggatccat
tcaatgggactggagcaagaccaggactaccaaatcacctgctatatcacatggagcccc
tgcctggcctgtgcctgcgcattggctgagctcaaaaaccatttccctcgactcacgctt
cggattttcgcctcccgcctgtacttccactggatcaggaaatttcagatggggctgcaa
cacctgtacaaatccggggtcctggtggctgtcatgagcctcccagagtttactgattgc
tgggaaaagtttgtaaaccaccggcaagtgttcttcactccctgggataaactagaggaa
cacagcagaagcatccagaggcggctcaggcggatcctgcagtcctgggatgtggatgat
ttaacagatgacttcagaaatttacggctttga

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