KEGG   Castor canadensis (American beaver): 109696607
Entry
109696607         CDS       T04791                                 
Symbol
Aff4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109696607 (Aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccan03021]
    109696607 (Aff4)
Transcription machinery [BR:ccan03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109696607 (Aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 109696607
NCBI-ProteinID: XP_020035292
UniProt: A0A250Y734
LinkDB
Position
Unknown
AA seq 1160 aa
MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIADRSIPKLVAIPKPTVPPTADEKSNPNFFEQRHGGSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRASAGSSSSTNSSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKP
QAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSNQSFPPSLMS
KSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHGNSMTELKPSSKAHLTKLKIPSQP
LDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGPGEQKR
YNPSAKTSNGHQSKSMLKDDLKLSSSEESDGEQDCDKTMPRNTPGSNSEPSHHNSEGADN
SRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNP
HKVSPASSVDSNIPSSQGYKKEGREQGAANSYTDPGGPKETSSATPGRDSKTIQKGSESG
RGRQKSPAQSDSTTQRRTVGKKQPKKAEKTATEEPRGGLKIESETPVDMATSMPSSRHKA
ATKGSRKPNIKKESKSSPRPTAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSS
QTPKYPDSNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDLNLL
TRIPGKPYKETEPPKGEKKNMPEKHTREAQKQASEKVSNKGKRKHKNEDDNRANESKKPK
TEDKNSSGHKPSSNRESSKQSAAKEKDLLPSPAGPVPSKDSKTEHGSRKRTISQSSSLKS
SNNSNKENSGSSKSSSSTSKQKKTEGKTSSSSKEVKEKAPNSSSNCPSSTPTPEASKPRR
TKLVFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQES
KSPFPMYSDTVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALK
YSKTLTEHLKNSYNNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGSYSSGGSSASASGSSV
TIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLAKEQKEFFAELDKVMGPLIFNASIMTD
LARYTRQGLHWLRQDAKLIS
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgcatgaaagaacgggaaaggcggaatcaggaa
attcagcagggtgaagacgccttcccacctagctcacctctctttgctgagccatacaaa
gttactagcaaagaagataaattatcaagtcgtattcagagtatgcttggaaactacgat
gaaatgaaggatttcatagcagacagatctataccaaagcttgttgcaattcccaagcct
acagtaccaccaactgcagatgaaaaatcaaacccaaatttctttgaacagagacatgga
ggctctcatcagagtagcaaatggactccagtaggacctgcacccagcacttctcagtct
cagaaacggtcctcaggcttacaaagtggacatagtagccagcgggcgagtgcaggtagt
agcagtagcacaaatagtagtggccagaggcatgaccgtgattcatacagcagtagccgg
aaaaaaggccagcatggatcagaacactccaaatcacgatcttcgagccctggcaaaccc
caggctgtttcttcactaagctctagtcattccaggtctcatgggaatgatcaccatagc
aaggaacatcagcgctccaaatcacctcgggaccctgatgccaattgggattctccttcc
cgtgtacctttttcaagtgggcagcactcaaatcagtctttcccaccttcattgatgtca
aagtccagttcaatgttacagaaacccactgcttatgtgcggcccatggatggacaggag
tccatggaaccaaagctgtcctctgagcactacagcagccagacccatggcaacagcatg
actgagctgaagcccagcagcaaagcccatctcaccaagctgaaaataccttcccaacca
ctggatgcatcagcttctggtgatgtgagctgtgtggatgaaattcttaaagagatgacg
cattcatggcctccccctctaacggctattcatacaccatgcaaaacagaaccttccaaa
tttccttttccaactaaggagtctcagcagtccaattttggccctggagaacaaaaaaga
tataatccttctgctaaaacttcaaatgggcaccagtcaaaatctatgttgaaagatgac
ttaaaactaagcagcagtgaagaaagtgatggggaacaggattgtgataagacaatgcca
aggaatacaccaggaagtaactctgagccttcacatcataatagtgaaggagcagataac
tccagggacgattccagcagccacagtggatctgaaagtagctctggatctgattcagag
agtgaaagtagttccagtgacagtgaggcaaatgagccatcccagagtgcatctcctgag
cctgaaccaccaccaacaaacaaatggcaacttgataattggttgaataaagttaatcca
cataaagtgtcaccagcttcttctgtagacagtaatatcccatcatctcaaggctacaaa
aaagaaggtcgagaacagggcgctgcgaatagctacactgatcctggtgggcctaaagaa
acaagttctgctactccgggacgagactccaaaaccatccaaaagggatcggagagtggg
cgtgggaggcagaagtctccagcgcaaagtgacagcacaacacagaggagaactgtaggc
aaaaagcaacccaaaaaagctgagaaaacagctactgaagagccccgtggaggtctgaag
atagaaagtgaaacccctgtagacatggcaaccagcatgccctccagcagacacaaagca
gccaccaaaggctcaaggaaacccaatattaaaaaagagtctaaatcttcccctcgacct
acagcagagaaaaagaaatacaaatcaacaagtaaatcttcccagaagtcacgggaaatc
atagaaacagatacctcatcctcagactcggatgaaagcgagagccttcctccttcctca
caaacgcctaagtaccctgacagcaataggactcctgttaaaccctcctctgtggaggaa
gaagatagctttttccggcagcgaatgttctctcctatggaagagaaggaacttctttca
cccctcagtgagcctgatgacaggtatccacttattgtgaagattgacctgaatctcttg
actagaataccaggaaagccttacaaagaaacagagccacctaagggggaaaagaaaaat
atgccagaaaagcacacaagagaggctcagaagcaagcctcagaaaaagtttccaacaaa
ggcaagaggaaacataagaatgaagatgataaccgagccaatgagagcaaaaaacccaaa
acagaagacaagaactcatcaggccacaagccatccagcaacagagagtcatctaagcag
agtgctgcaaaagaaaaggacttgctaccttcacctgctgggcctgttccttcaaaagat
tcaaaaacagagcatggctctcggaagaggacaatcagccagtcttcttccttaaagtca
agcaataatagcaacaaggaaaatagtggcagtagcaagagcagttcctccacatcaaag
cagaagaaaactgaaggaaagacttccagtagctccaaggaggttaaggaaaaggctcca
aatagctcttctaactgtccttcatctacaccaactcctgaagcttctaaacctcggaga
acaaagcttgtctttgatgacagaaattattcagcagaccattatttacaagaagcaaaa
aaactaaagcacaatgcagatgcattgtctgacaggtttgagaaagcagtatactatctt
gatgctgtggtatctttcattgaatgtgggaatgcattagagaagaatgctcaggaatcc
aaatccccattccctatgtattcagacacagtggagctcatcaagtatactatgaagcta
aagaattacttagcgccagatgctacagctgcagataaaagacttacagtactttgcctg
agatgccagtctttgctatacctgaggctattcaaactgaagaaggaaaatgctctgaag
tactcaaagacactgacagagcacctgaagaattcttacaataattctcaagcaccatca
cctggtttgggaagcaaagctgttgggatgccttccccggtttctccaaagctgtctcca
ggcaattcggggagttattcttctgggggcagtagtgcttcagcaagtggttcttcagtt
accattccacagaagatccaccagatggcagccagctatgttcaggttacatccaacttc
ctctatgccaccgaaatttgggaccaagctgaacagcttgccaaagagcaaaaagaattc
tttgctgaactggataaagtaatgggccctctcatctttaatgcaagcatcatgacagat
ctagctcgttatacccggcagggactacactggcttcgccaggatgccaagttgatatct
tga

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