KEGG   Castor canadensis (American beaver): 109698738
Entry
109698738         CDS       T04791                                 
Symbol
Smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109698738 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccan03041]
    109698738 (Smndc1)
Spliceosome [BR:ccan03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109698738 (Smndc1)
 Complex B
    109698738 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109698738 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 109698738
NCBI-ProteinID: XP_020038698
UniProt: A0A8B7W471
LinkDB
Position
Unknown
AA seq 280 aa
MSELEYLHVRVFVVFKKMHLQLCSELGERFWLWKRTSNIDFLMSEDLAKQLASYKAQLQQ
VEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDK
CMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNK
PMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSI
FASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 843 nt   +upstreamnt  +downstreamnt
atgagtgagctggaatacctacacgtgagagtgtttgtggtgtttaagaaaatgcatctg
caactgtgtagtgaactgggtgaaagattttggctctggaaaagaacttctaacatagac
tttttaatgtcagaggatctagcaaagcagctggccagctacaaagctcagctccagcaa
gtagaagctgcactatctggaaatggagaaaatgaagatttgctaaaattgaagaaagat
ttacaagaagttatagaactaaccaaagaccttctgtcaactcaaccttcagaaactctt
gcaagttcagacagttttgcctctactcagcccactcattcatggaaagtaggagacaag
tgtatggcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagat
gaagaaaatggcaccgctgcaatcacctttgctggttatggcaatgctgaagtgactcca
ctgttgaacctcaagcctgtggaagaaggaaggaaggcaaaggaggacagtggcaacaaa
cccatgtcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttg
aaaaaagcacagagaataaaagaacttgagcaggaaagagaggatcagaaggtgaaatgg
caacaattcaacaacagagcttattctaaaaataaaaaaggccaggtaaagaggagtatt
tttgcttcacctgaaagtgtaaccggcaaagtgggagtaggaacttgtggaattgctgat
aaacccatgacgcaatatcaagatacctctaaatacaatgtcaggcatttgatgcctcag
taa

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