KEGG   Castor canadensis (American beaver): 109700677
Entry
109700677         CDS       T04791                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04060  Cytokine-cytokine receptor interaction
ccan04061  Viral protein interaction with cytokine and cytokine receptor
ccan04062  Chemokine signaling pathway
ccan04064  NF-kappa B signaling pathway
ccan04360  Axon guidance
ccan04670  Leukocyte transendothelial migration
ccan04672  Intestinal immune network for IgA production
ccan04810  Regulation of actin cytoskeleton
ccan05163  Human cytomegalovirus infection
ccan05200  Pathways in cancer
ccan05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    109700677 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109700677 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    109700677 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109700677 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    109700677 (Cxcl12)
   04672 Intestinal immune network for IgA production
    109700677 (Cxcl12)
   04062 Chemokine signaling pathway
    109700677 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    109700677 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    109700677 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    109700677 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    109700677 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccan04052]
    109700677 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:ccan00536]
    109700677 (Cxcl12)
Cytokines and neuropeptides [BR:ccan04052]
 Cytokines
  Chemokines
   109700677 (Cxcl12)
Glycosaminoglycan binding proteins [BR:ccan00536]
 Heparan sulfate / Heparin
  Chemokines
   109700677 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 109700677
NCBI-ProteinID: XP_020041542
UniProt: A0A250XUY0
LinkDB
Position
Unknown
AA seq 119 aa
MDAKVVAVLALVLAALCISDGKPVSLSYRCPCRFFESHVARANVKHLKILNAPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNKGHREEKVGKKEKIGKKKRQKKRKAAQKRKN
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgccaaggttgtcgccgtgctggccctcgtgttggccgcactctgcatcagcgac
gggaaacctgtcagcctgagctacagatgcccgtgccgattcttcgagagtcatgttgct
agagccaacgtcaagcatctcaaaatcctcaacgctcctaactgcgcccttcagattgtc
gcaaggctgaagaacaacaacagacaagtgtgcattgacccgaaattaaagtggattcag
gagtacctggagaaagctctaaacaaggggcacagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagcgacagaagaagagaaaggctgcccagaaaaggaaaaactag

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