Castor canadensis (American beaver): 109701701
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Entry
109701701 CDS
T04791
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109701701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109701701
Spliceosome [BR:
ccan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109701701
Complex C
U5 SnRNP specific factors
109701701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
109701701
NCBI-ProteinID:
XP_020042800
UniProt:
A0A8B7WGP9
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MTLLPQPPEHLGLQVSTSALRRKFLTQNLLGLNSEREKDCPENCYEIYVFLQVVASFLAK
ANSINSRTWQLRGRLGGVFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER
LIKHAVQERLAVTVCINKIDQLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILS
PLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAP
TSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
NRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIEKEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
ELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacactcctacctcagcctccagagcatctggggttacaggtatccaccagtgcactc
cggaggaagtttctgactcagaaccttctggggttgaacagtgagagagaaaaagactgt
cctgagaactgttatgagatctatgtgtttctgcaagttgtggcctcttttctggcaaaa
gcaaactccataaatagcagaacatggcagttaaggggtagactaggaggagtcttcaac
atcatggacactccaggacatgtgaatttttccgatgaggtcacagctggcttgcgcatc
tcagatggtgttgtccttttcatcgatgctgctgagggggtgatgctgaatacagagcgg
ctgataaagcatgcagtacaggagaggctagccgtcaccgtgtgcatcaacaaaattgac
cagctaatcctggagctgaagctgcctccaactgatgcttattacaaactccgtcacatt
gtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctttcg
ccactcctgggcaatgtctgcttctccagctcccagtatagcatctgtttcacactgggc
tcctttgccaagatctacgctgacaccttcggtgacattaattaccaggaatttgctaaa
agactctggggtgacatctatttcaaccctaagacgcggaagttcacaaaaaaggcccca
accagcagctcccagaggagcttcgtggagtttatcttggagcccctttataagatcctt
gctcaggtggtaggtgatgtagacaccagcctcccaaggaccctggatgagcttgggatc
catctgaccaaggaggagctgaaactgaacatccgccccctgctcaggctggtctgcaag
aagttctttggagaattcacaggctttgtggacatgtgtgtgcagcatatcccttctcca
aaggtgggcgccaagcccaagattgagcacacatacactggtggtgtggactccgacctt
ggcgaggcaatgagtgactgtgaccctgatggacccctgatgtgccacactactaagatg
tacagcacagatgatggagttcagtttcatgcctttggccgggtactgagtggcacaatc
catgctgggcaacctgtgaaggtgctaggggaaaactatacccttgaggatgaggaagac
tcccagatatgcactgtgggccgcctttggatctctgtggccaggtaccacatcgaggtg
aaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaatcgtgaag
acagcaaccataactgaacctcgaggcaatgaagaggctcagattttccggcccttgaag
ttcaataccacatctgttatcaagattgctgtggaaccagtcaacccctcagagctgccc
aagatgcttgacggcctgcgtaaggtcaacaagagctatccatccctcactaccaaggtg
gaggaatctggtgagcatgtgatcctaggcactggggagctctacctagattgtgtgatg
catgatctgcggaagatgtactcggagatagacatcaaggtggctgacccagttgtcaca
ttctgtgagacagtggtagaaacatcctctctcaagtgttttgctgaaacacctaataag
aagaacaagatcaccatgattgctgagcctcttgaaaagggcctcgctgaggacatagag
aaggaggtggtccagatcacctggaacaggaagaagctgggagagttcttccagaccaag
tacgactgggatctcctggctgcccgttccatctgggcttttggccctgatgccacaggc
cccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttcttggctca
gtgaaggacagcatcgttcaaggtttccagtggggaaccagggaagggcctctctgtgat
gagttgattcgaaatgtgaagtttaagatcctggatgcggtggttgcccaggagcccctg
caccggggtgggggccagatcatacccacagcccggagagttgtctactctgccttcctc
atggcaactcctcgtctgatggagccttactactttgtagaggtccaggcccctgcagat
tgtgtgtctgctgtttacactgtcctagccaggcgcagggggcacgtgactcaagatgca
cccatcccaggctccccactttacaccatcaaagctttcataccagctatcgactctttt
ggctttgaaactgatctccggacccatacccagggacaggccttttccctgtctgtcttc
caccattggcagattgtacccggtgatcctctggacaagagcattgtcatccgcccctta
gagccacagccagctcctcacctggcccgagaattcatgatcaaaacccgtcggagaaag
ggcctgagtgaagatgtgagcatcagcaagttcttcgatgatcctatgttgctggagctt
gccaaacaggatgttgtgctcaattaccccatgtga
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