Chryseobacterium capnotolerans: H5J24_04650
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Entry
H5J24_04650 CDS
T08205
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H5J24_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_04650
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
H5J24_04650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
AAA_21
DUF4404
Motif
Other DBs
NCBI-ProteinID:
UHO39402
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Position
complement(1032700..1034847)
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AA seq
715 aa
AA seq
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MYIDKEDLDELEFPQLLAEISPFAYSPKTREKILQLRPMEIDEAELSLKKTSEYLSSFES
SNAIPFDEYEDIESELKLMLIENYRLENSAFIKIKTITEQIGRLQKFFPTMPETFPTLLE
EVSVLEFRKEIIDKVDKVFNRFGEVKNEASPALKGIRTEIQHAKKAIQENFNRALTTYGQ
SDFLDDIRETIIDDQRVLAVKSGFKKRVPGRTLGISKTGSITYIQPDSVVKHYFKLRESE
EEEKKEIDKVLRQLTTELAEFQPQLWRYQMYIFDLDLVRAKAKFAELINGILPKINRHKT
LRLKDAFHPLLWLRNKVENKIIHPQTLALTEHNRIICISGPNAGGKSITLKTVGLLQLMI
QSGILVPVHPKSEMFFFEKIMTDIGDNQSIENHLSTYSSRLKKMSGIIREADSDTLLLID
EFGTGSDPELGGALAESFMEFFYDKKSFAIITTHYTNIKLVIEQLPNAQNAAMLFNEETL
EPMYKLEVGQAGSSFTFEVAEKNKIPRFIIHSAKKKVEHDIVNLDKTIVKLQQEKFEVEK
LKSDLAERKESVEDKRDNLQKLNDQLQQKLFNFQKLYEEEHRKLQFGNKIETFIDSYTKG
KSRKDVVKDFVKLLEQEKFRKIGADKDESKRLQVVKRKITQQLKKEEVIEKIAETNEKLE
EKRKSDREIWMKIGQRVRITGSTSVGTIEKISRNKVIVNYGTFKTTIDADELERI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatagataaagaagatttagacgaattagagtttccgcaattgctcgcggaaatc
tccccatttgcgtattctcccaaaacaagagaaaaaattcttcaacttcgtccgatggaa
attgacgaggcggaactttcattgaaaaaaacgtcagaatatctgtcgagttttgaaagt
tcaaatgcgattccgtttgatgaatatgaagatattgaaagtgagctgaaactgatgctg
attgagaattaccgtctggaaaacagtgctttcatcaaaataaaaaccatcacggaacag
atcggaagattacagaagttcttccctaccatgccggaaacgtttcctactttattggaa
gaggtttcggtattggaattcagaaaagagatcattgataaggttgacaaggtatttaac
cgttttggtgaggtaaaaaatgaggcttctcctgctttaaaagggataagaacagagatc
cagcatgctaaaaaagccattcaggaaaacttcaaccgtgctctgacaacttatggacag
agtgactttttggatgatatacgggaaacaattattgatgaccaaagggttttagcggta
aaatcaggttttaagaaaagagttccgggaagaaccctgggaatttcaaaaaccggttct
atcacctatatccagccggacagtgttgtaaaacattatttcaaacttcgtgaaagtgaa
gaggaagagaaaaaagagattgataaagtcttaagacagcttaccacagaacttgcagaa
ttccagcctcagctttggaggtatcagatgtatatttttgatcttgatctggtaagggct
aaagctaagtttgcagaacttatcaatggtattcttcctaaaatcaaccgccataagaca
ttgaggttaaaagatgcctttcatcctttattatggttaagaaataaggttgagaacaaa
atcattcacccacaaactctggctttaacggaacataacagaattatctgtatttccggg
cctaatgctggtggaaaatccattaccctgaaaactgtcgggttgctgcaactgatgatt
cagagtggtattttggttcctgttcatccaaagtctgaaatgtttttctttgagaagatc
atgactgatattggtgacaatcaatccattgaaaatcatctatccacgtattcatcaagg
ttaaagaaaatgtccggaatcatccgtgaggctgattcggatacgcttttactgattgat
gagttcggaacgggttctgatcctgaattaggtggtgctttggctgaaagtttcatggag
tttttctatgataagaagagttttgcgatcattacaacgcattacaccaatatcaaactg
gttatagaacagcttccgaatgctcagaatgctgcaatgcttttcaacgaagaaacgctg
gagcccatgtacaaactggaagtaggacaagcaggaagttcatttacttttgaagttgct
gagaagaataaaatcccaaggtttatcattcattctgccaagaaaaaagtggaacatgat
attgtgaatcttgataaaacgattgtaaaactgcagcaagaaaagtttgaggttgaaaaa
ctgaaatctgatcttgcagaaagaaaagaatctgtagaagataaacgtgataatcttcag
aaactgaatgaccagcttcagcagaaacttttcaatttccagaaactttatgaagaggaa
catcgtaaacttcagtttggaaacaagattgaaactttcatcgacagctatacaaaagga
aagtccagaaaagatgtagtgaaggattttgtaaaactgctcgaacaggaaaaattcaga
aagattggtgctgataaagatgaatccaagcgccttcaggtggtgaagagaaagatcacc
caacagcttaagaaagaagaggtaattgaaaaaattgcagaaaccaacgaaaaactggag
gaaaaacgcaaaagtgaccgcgaaatatggatgaaaataggccagcgtgtccgaattaca
ggaagtacaagcgtaggaaccattgagaaaatttccagaaataaagtgattgtcaattat
ggaactttcaaaacaaccattgatgcagatgaattagagagaatctaa
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