Chryseobacterium capnotolerans: H5J24_08310
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Entry
H5J24_08310 CDS
T08205
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03030
DNA replication
ccao03430
Mismatch repair
ccao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H5J24_08310
03430 Mismatch repair
H5J24_08310
03440 Homologous recombination
H5J24_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccao03032
]
H5J24_08310
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_08310
Enzymes [BR:
ccao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H5J24_08310
DNA replication proteins [BR:
ccao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H5J24_08310
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H5J24_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
UHO40005
LinkDB
All DBs
Position
complement(1817875..1818432)
Genome browser
AA seq
185 aa
AA seq
DB search
MDFCAIDFETATHEKSSACEMGICVVQDSKIVETKTWLIKPPSFPYFSKFNIAVHGIQPE
DVQDAPTFDEIWYEAEELMYGSLMIAHNAGFDASVLRGCFEHYGIFPPKMNYLCSIQLAK
KSWNYLPKYGLKPLAEYHQIQFNHHRAGADAEVCAKISLLAFEKLFITRNEEINESVLKN
YIKKL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatttctgtgcaatagattttgaaacagccactcatgagaaaagctctgcttgtgag
atgggaatctgtgtggtacaggactccaagattgttgagacgaaaacatggttaataaaa
cctcccagtttcccctattttagtaaattcaatattgcagtacacggcatacagccggaa
gatgtacaggatgctcctacctttgatgagatttggtatgaggcagaagaattaatgtat
ggatcactgatgattgcccataatgcagggtttgatgcttcagttttaagaggctgtttt
gaacattatggaatattccctcctaaaatgaattacttgtgcagcatacagcttgccaaa
aaatcatggaactatcttccaaaatatggtctgaaacctttggcagaataccatcagatt
caattcaaccaccacagagcgggtgctgatgcagaggtttgtgcaaaaatatccctgttg
gcatttgaaaagctttttattacaagaaatgaggaaataaatgaatctgttttaaagaac
tatattaaaaaactgtaa
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