Chryseobacterium capnotolerans: H5J24_08425
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Entry
H5J24_08425 CDS
T08205
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao02024
Quorum sensing
ccao03060
Protein export
ccao03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H5J24_08425 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H5J24_08425 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H5J24_08425 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccao02044
]
H5J24_08425 (ffh)
Enzymes [BR:
ccao01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H5J24_08425 (ffh)
Secretion system [BR:
ccao02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H5J24_08425 (ffh)
Eukaryotic Sec-SRP protein
H5J24_08425 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
AAA_22
CbiA
CLP1_P
ATPase
KAP_NTPase
APS_kinase
ResIII
nSTAND3
ATP_bind_1
AAA_18
SLFN-g3_helicase
AAA_16
AAA_24
ArsA_ATPase
AAA_30
AAA_31
NPHP3_N
AAA_33
AAA_19
DO-GTPase1
MMR_HSR1
AAA_14
NACHT
RRM_Nup35
6PF2K
KTI12
TsaE
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UHO40024
LinkDB
All DBs
Position
complement(1840867..1842228)
Genome browser
AA seq
453 aa
AA seq
DB search
MFNSLQDKLDKALHNISGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GENVLTSLTPGQLMTKIVHDELVDLMGGSQEGINLSGKPSVILIAGLQGSGKTTFSGKLA
NYLQTKRNKKPLLVACDVYRPAAIDQLKVLGGQINVPVYTEEGATNPSTIAENAINFAKA
NNHDVVIVDTAGRLAIDEQMMNEIKSVHYFIKPQETLFVVDSMTGQDAVNTAKAFNDALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVEISDDAFKHIEAIIYSMTPEERRRPSIINTQRKNRIARGAGRKIEDVNQLMKQFDQMG
KMMKMMQGPQGKQMMQMMSKMPNMPGMGGMFGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagtttacaggataaattagacaaggcattacataatatttccggacgtgga
aaaattaccgaaatcaatgtggcggaaaccgtaaaggaaatccgtagagcattggtagat
gccgacgttaactataaagttgcaaaggatcttaccaaaagagttcaggataaagcttta
ggcgaaaatgttcttacttcccttactccggggcagttgatgactaaaattgttcatgac
gagcttgtggatttaatgggaggttctcaggagggaattaatctttcgggaaaaccatct
gtaatccttattgcaggtcttcagggttctggtaagactactttctctggaaaacttgct
aattatttacagacaaaaagaaataaaaaaccattattggtagcctgtgacgtttaccgt
cctgctgcgatcgatcagctaaaagtattaggaggacaaattaatgttcccgtttatact
gaagaaggagctacaaacccttctactatcgctgaaaatgccatcaattttgcaaaggcc
aacaatcacgatgtagtaatcgtggatacggcaggtcgtttagcgattgatgagcagatg
atgaacgagatcaagtctgtacattacttcatcaagccacaggaaacccttttcgtagtg
gattccatgactggtcaggatgctgtgaatactgctaaagcattcaacgatgcgttgaac
tttgacggggttgttttaaccaagttagatggtgatacaagagggggtgctgctttaacg
atccgttctgtagttgaaaaaccaatcaaattcatctctacaggagagaaaatggaagct
ttagaccttttctacccggaaaggatggcagacagaatcttaggaatgggagatgttgtt
tccttagtagaaagagctcaggagcagtttgatgaagaagaagctaaaaaacttcacaag
aaaatcgctaaaaatgaatttggttttgatgatttcttaaagcagatcaaccagattaag
aagatgggtaacatgaaagaccttatgggaatgattcctggggttggaaaagccatcaaa
gatgtagagatcagtgatgatgcatttaaacacattgaagcgattatctactctatgaca
cctgaggaaagaagaagaccttctattatcaatactcagagaaaaaacagaattgcaaga
ggtgccggaagaaagattgaagatgtaaatcaattgatgaaacaattcgatcagatgggt
aaaatgatgaagatgatgcagggacctcaaggaaagcaaatgatgcagatgatgagcaaa
atgccgaatatgcctggaatgggtggaatgtttggaaaataa
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