Chryseobacterium capnotolerans: H5J24_13720
Help
Entry
H5J24_13720 CDS
T08205
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H5J24_13720 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccao03019
]
H5J24_13720 (rny)
Messenger RNA biogenesis [BR:
ccao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H5J24_13720 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Hemocyanin_M
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UHO36861
LinkDB
All DBs
Position
complement(2954887..2956452)
Genome browser
AA seq
521 aa
AA seq
DB search
MIEVIVGVVCLVIGAAVGLFFSRSSLNTKAKFIIDDAKKNAENLIEKANVQAESIKKEKN
LQAKEKFLELKSQHDADIQAREKKMQEAEKRTKDKEHKVTDELSKTAKLEKDLDRQIADY
AKKNEILDRKQQELDIATTKKVEILEKISNYTAEEAKAELVETMRAEAKTRAQAHVQSIM
EEAQLNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALEAV
TGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEEEI
IEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLNVK
LAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEIEMKSLLSPI
IQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESGKV
NDEVASQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagttatagtcggtgttgtatgtttagtaatcggggctgctgtggggctgttt
ttctccaggagttctctgaatactaaagcaaaatttattatagatgatgcaaagaaaaac
gccgaaaaccttatagaaaaagctaacgtacaggctgaatccataaagaaagaaaagaat
cttcaggctaaagaaaaattccttgaactgaaatcacagcatgatgctgatatccaggcc
cgcgagaaaaaaatgcaggaagctgaaaaaagaacgaaggataaggagcacaaagtgact
gacgaacttagtaagactgcaaaattagagaaagatttagacagacaaattgcagactac
gctaagaagaacgaaattctagacagaaaacagcaggaattagatattgctaccactaaa
aaagtagagatccttgaaaaaatctctaattataccgctgaggaagctaaagcagaattg
gtagaaaccatgagagctgaagctaaaacaagagctcaggctcacgttcagagcatcatg
gaagaagctcagctgaatgctaaaaacgaagcgagaaagattgttatccaaacgatccag
agaatcgggaccgagcaggctatcgaaaactcagtatcagtattcaacattgaatctgac
gaagtaaaaggtagaattatcggtagagaaggtagaaacatccgtgctttagaagcagta
acaggagttgagattattgttgatgatactccggaagctattcttctttcatgtttcgat
ccggtaagaagagagatcgcaagattatcacttcacagattggttactgatgggagaatt
cacccggcaagaattgaagaagttgtagaaaagacaagaaaacaaattgaagaagagatc
attgaagtaggaaaaagaacgattattgatttaggaatccacggattacaccctgaatta
atcaagatcgttggtagaatgaaataccgttcttcttatggacagaacttattacagcac
tcaagagaagtagcaaatattgctgcaacaatggctgctgaattaggattaaatgttaaa
ttagctaagagagcaggtcttttacacgatatcggtaaagttcctgagcaggaatcagaa
ttaccacacgctctattaggaatgcagtgggctgagaaatacggtgaaaacccagaagta
gtgaatgctattggagctcaccacgacgaaattgaaatgaagtctctattatctccaatc
attcaggttgccgatgcgatctcaggagcaagaccgggagcaagaagacaagtactggaa
tcttacattcagagactaaaagatcttgaatctgcggcattaagcttcgatggtgtatca
agcgcttatgcaattcaggcaggtagagaactaagagtaatggtggagagtggaaaagta
aacgacgaagtcgcttctcaactttcttacgatatctctgaaaagatccagaatgaactt
acttaccctggacaggtgaaagtaaccgtaatcagagaaacaagagccgtgaatattgca
agataa
DBGET
integrated database retrieval system
