Chryseobacterium capnotolerans: H5J24_14355
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Entry
H5J24_14355 CDS
T08205
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccao
Chryseobacterium capnotolerans
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccao03016
]
H5J24_14355 (truB)
Enzymes [BR:
ccao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H5J24_14355 (truB)
Transfer RNA biogenesis [BR:
ccao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H5J24_14355 (truB)
Prokaryotic type
H5J24_14355 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
UHO36963
LinkDB
All DBs
Position
complement(3093089..3093787)
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AA seq
232 aa
AA seq
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MTAEELKSGYIFLLDKPLDWTSFQAVNKMKYKLKREFDLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHQDISHITEEQVKEALEKF
VGEIEQKPPVYSAIKIDGERAYNLARAGEEVEMKSRKTTIHYLNDIKIDFPLVSFTVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGDYKIEDATDQFLNNDFRFQGE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaagaactgaaatcaggatacatatttttattggataagcctttggactgg
acttccttccaggctgtcaataaaatgaaatataaacttaaaagggagtttgatcttcct
aaaaaatttaaaatcggacatgcgggaactcttgatccaagggcgaccgggcttctgatt
gtttgctgcggaaaattcaccaagaaaattcctgaaattcaggatgctcctaaagagtat
tggacagaaatcaaaataggagtacaaactgaatcttacgatactgaaaaaccggaaatc
cttcatcaggatatttcgcatattacagaagagcaggtaaaagaagccttggagaaattc
gtaggagaaattgaacagaaaccacctgtttactctgctataaaaattgatggtgaaaga
gcctacaatctggccagagcaggagaggaagtagaaatgaaatcaagaaaaactacgatt
cattatctcaatgatataaaaattgattttcctttggtaagtttcaccgttggatgttca
aaaggaacctacatcagaagccttgctcatgatatagggcaagaattgggagtaggagct
tatttgactcaattgaggagaacaaagatcggagattataaaatcgaggatgctacagat
cagtttttaaataatgattttagatttcaaggcgaataa
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