Chryseobacterium capnotolerans: H5J24_16445
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Entry
H5J24_16445 CDS
T08205
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03420
Nucleotide excision repair
ccao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5J24_16445
03430 Mismatch repair
H5J24_16445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_16445
Enzymes [BR:
ccao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H5J24_16445
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5J24_16445
MMR (mismatch excision repair)
Other MMR factors
H5J24_16445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
AAA_30
ADDB_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
UHO37314
LinkDB
All DBs
Position
complement(3547167..3548561)
Genome browser
AA seq
464 aa
AA seq
DB search
MLNSRQKKAAFEISGNTIVSASPGTGKTKTLIARAQKKLESIPKHKSLALITYTNAAADE
IASRLNTDDKDIFIGTIHRFCLEFILRPFSWIYKWHKPRIISYDELKEFIEINSDIELGD
NPLDELSKIKRLLNGDLDCSNTDNIESWIYISELYFNFLRDKKAIDFNEILFKSYKIVSE
NDFVAQSIANKFYEISIDEFQGTNIFQYEILKAIRNESEDCTFFMVGDEKQKIYAFAGAI
DNAFSRASYDFQAEIENLDTTYRSTTNIVKGYSILFKDHIELQNDSKYKDFNFDIVICET
KYDNNNDYIANTIAKLISDGKAELSDIAILTTSWRDAYFISKSLRQKYHVVGLGSLPHKN
MNTSSFGLIRSLSKFLFSPSIINLRIIKRNFDSHSLENNIVFTEKELTYKINSLITSFKE
LELTANLTKGLSSVKHIFDTIFSVNNSDIEEIINSINNIDKSQL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatagtaggcagaagaaagcagcatttgaaatctctggaaatacaatagtaagc
gcctctccaggaacaggtaaaacaaaaactctaattgctagagcacaaaaaaaacttgag
tctattcctaaacataagtctttagctcttataacttatacaaatgctgccgcagatgaa
attgctagtagattaaataccgatgataaagatatatttattggtacaattcatagattt
tgccttgaatttatattaagacccttttcttggatttacaaatggcataagccaagaata
atttcatatgatgagctgaaagaatttatagaaataaactccgatattgagttaggagat
aatccacttgatgaactaagtaaaataaaaagacttttaaatggtgatttagattgttca
aatactgataacattgaatcgtggatatatatttctgaattatatttcaatttcttaaga
gataaaaaggcaatagatttcaatgaaattttattcaaatcatataagattgtttctgaa
aatgattttgttgcacaatctatagcaaataaattttacgaaatatcgattgatgagttt
cagggtacaaatatatttcaatacgaaattttaaaggctattcgaaatgaatctgaagat
tgtacattttttatggttggagatgaaaaacaaaaaatatatgcctttgctggagctatt
gataatgcattcagtagagcatcatatgattttcaagcagaaatagaaaatttagataca
acatatcgttctactacaaatatagttaaaggatactcaattctttttaaagatcatatt
gaattacagaatgattcaaagtacaaagactttaattttgatatagtaatttgtgaaacc
aaatatgacaataataatgattacatagctaataccatagccaagcttataagtgatggt
aaagctgaattatccgatattgctatattaacaacgagttggagagatgcttatttcata
agtaagtcacttcgtcaaaagtatcacgtggttggtcttgggtctttacctcataaaaat
atgaatacttcctcttttggacttatacgttctttaagcaaatttttattttcaccttca
attataaacttaagaataatcaaaagaaattttgattctcattctttagaaaataacata
gtatttacagaaaaagaattaacttataaaattaactcattgataacaagttttaaagag
cttgaattaactgctaatttaactaaaggtttaagttcagtaaaacacatatttgataca
atttttagtgtaaataactctgatattgaagaaataatcaacagtataaataatattgat
aaatctcaattataa
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