Chryseobacterium capnotolerans: H5J24_17005
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Entry
H5J24_17005 CDS
T08205
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03030
DNA replication
ccao03410
Base excision repair
ccao03420
Nucleotide excision repair
ccao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H5J24_17005 (polA)
03410 Base excision repair
H5J24_17005 (polA)
03420 Nucleotide excision repair
H5J24_17005 (polA)
03440 Homologous recombination
H5J24_17005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccao03032
]
H5J24_17005 (polA)
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_17005 (polA)
Enzymes [BR:
ccao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H5J24_17005 (polA)
DNA replication proteins [BR:
ccao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H5J24_17005 (polA)
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H5J24_17005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5J24_17005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
DUF2202
HHH_2
ACS_CODH_B_C
DUF1198
Motif
Other DBs
NCBI-ProteinID:
UHO37396
LinkDB
All DBs
Position
complement(3661853..3664690)
Genome browser
AA seq
945 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSTGLDTSAIFGFTNSLIELIRRERPTHL
AVVFDVGRASVRTDDFADYKANRSETPEAIKIAVPYIHRILEGMHIPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVEEVKAKYEIEDP
KQVIDYLAMMGDAVDNIPGLEGVGEKTAMKFLKEYGSIENLLANTDKLKGKLKEKVEASA
ERGIMSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFEEIEFRRLYENLYRAFAPAAA
AETVVVSEVEVKQVPSGSEVKGQVMQLDLFANFEELDQATSTKSSIENNDHLYQFIDNPK
AQKKLVDNLVKQSAVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSENREEVLQTLE
IFRPFFEKEDLLKIAHNLKFDYKILKQYGITVKGVMFDTMIAHYLLNPDGRHGMDYLSEV
YLNYKPVSIETIIGKKGKKQGTFRDADLRTQTDYAAEDADVTFQLYELFAPQLKKENLEE
LFFNIEMPLMEVLAKMELAGISLDEKWLAQESIDLENDLRNLEKTIFELSEEEFNMNSPK
QLGEILFEKMQLDPKAKKTKTGQYATSEDVLQKLASKHEIIKHILEYRTYQKLKSTYVDA
LPSQIDKLDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKIIS
ADYSQIELRLIAEISGEDNMIKAFQDGEDIHASTAAKLFKIPLAEVSKTQRSQAKTVNFG
IIYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVNKARQMGYVETILGRKR
HLKDINSNNFVVRGHAERNAVNAPVQGSAADIVKIAMIKIDRELEEQQLKTKMLLQVHDE
LVFEAPADEIEAASKLIKTEMENALKTQVPLLVEIGVGDNWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaacacaagataaaaggctgtttctcatcgatgcttatgcgatgattttcaga
ggatattacgcattgatcagaaatccaagactaaccagtactggtttggatacttccgcc
atctttggatttaccaattctttgatcgaattgatcagaagagaaagaccaactcatttg
gctgttgtttttgatgtaggaagagcaagcgtaagaactgatgattttgcagactataaa
gcaaacagaagtgaaactcctgaagccatcaaaattgcagttccatatattcacagaatt
ctggaaggaatgcatattcccattcttggagtggaaggatatgaagcagatgatgtaatt
ggtactattgcctgcaaagcagaaaaagaaggctacaccacttttatggtaactcctgat
aaagactttgcacagctggttacagataaaatcaaaatttataaaccaggactaaaagga
ggagacatagaaatccttggtgtagaagaagtaaaagctaagtatgagatcgaagatcct
aaacaagtgatcgattatttggccatgatgggagatgccgtggataatatccctggattg
gaaggagtaggagagaaaacggctatgaagttccttaaagaatacggcagcattgaaaat
ctactggctaatactgataagcttaaaggcaagctgaaagaaaaggttgaagcctctgca
gaacgcggaattatgtctaaaaaactagctaccattatctgtgatgctcctatagaattt
caccaggaacaatacgatcttgaaactccggattttgaaaaagtgaaagaagttttcgaa
gaaattgagttcagaagactgtatgaaaacctttacagagcctttgctccagctgctgcc
gctgaaaccgtagtcgtaagtgaagtagaagtaaaacaggtcccatctggatcggaagta
aaaggacaagtgatgcagcttgatctttttgcgaatttcgaagagctagatcaggctact
tctacaaaatcgtctattgaaaataatgaccatttgtatcagtttatcgacaatccgaag
gctcagaaaaaactggtagacaatcttgtaaagcaaagtgctgtttgttttgatacagaa
actacttcattaaatgaactggaagcagaattagtaggaatgagtttttcctataaaaaa
ggattagcctattatatccctttatccgaaaaccgagaagaagtattgcaaacccttgag
atcttcagaccgttttttgaaaaagaagatttgctgaaaatcgctcacaatctgaagttc
gattataaaatattaaaacagtacggcatcactgtgaaaggagtgatgtttgatacgatg
attgcccattacctgttgaatcctgacggaagacacggtatggactatctttctgaagta
tacctgaactataaacccgtttccattgaaaccatcattggtaagaaagggaaaaagcaa
ggaacattcagagatgcagatcttaggacacagacagattatgcagcggaagatgccgat
gtaaccttccaattgtatgagttgtttgctccacaactgaaaaaagaaaatctggaagag
cttttcttcaatattgaaatgcctttaatggaagttctggcgaaaatggaactggcaggg
atctctttagatgaaaaatggctggcacaggaaagtatagatcttgaaaatgacctgaga
aatctagaaaaaacaatttttgaactttcagaagaagaattcaatatgaattcaccaaag
cagctgggagaaatcctgtttgaaaaaatgcagcttgatcccaaagctaaaaagacaaaa
acaggacaatacgctacttcggaagatgtacttcagaaactagcttcaaagcatgagatc
atcaaacatatcctggaatacagaacctatcagaaattaaaatcaacctatgtagatgca
ttgccatcgcagattgataagctagataatagagtacacaccaatttctctcagactaca
gccgcaacaggccgtctggcgagtgtgaatccgaaccttcagaatattccgatcagaaca
ttaagagggcagcagattcgtggagcctttgtttccggagaagggaagaagattatctct
gccgattattcacagatcgaacttcgtctgatcgctgaaatttcaggagaagacaatatg
attaaagcatttcaggacggagaagatattcacgcttccactgcggcaaaactctttaaa
attcctttggctgaagtttcaaaaactcagaggagccaggctaaaacggtaaacttcgga
attatttacggacaaggagcttttgctttagctgaacaaaccggattatcccgtacagaa
gctaagcagatgattgaagcctatttcgaaacctatccgaaactgaaggaatatatggca
gagcaggtgaacaaagcccgtcaaatgggatatgttgaaaccattctgggaagaaaacgt
catttaaaagatattaattccaataatttcgtagtgagagggcacgcagaaagaaacgcg
gtaaacgccccggtacagggaagtgcagccgatatcgtgaaaatcgctatgattaaaata
gaccgtgaattggaagaacagcaactcaaaacaaaaatgctgcttcaggtacacgacgaa
ttggtattcgaagctccggcagatgaaattgaggccgcttcaaaactcatcaaaaccgaa
atggaaaatgccttgaaaacgcaagttccgttattggtagaaataggagtaggagataac
tggctggaagcccattaa
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