Chryseobacterium capnotolerans: H5J24_19040
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Entry
H5J24_19040 CDS
T08205
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5J24_19040 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_19040 (uvrC)
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5J24_19040 (uvrC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH_2
HHH
GIY_YIG_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UHO37719
LinkDB
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Position
4080495..4082291
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AA seq
598 aa
AA seq
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MNPSLELQLKTLPSEPGVYRYYDKNEQLLYVGKAKNLKKRVLSYFNKNLSGYRIKIMVGK
IQRLETTIVNSEYDALLLENNLIKEHQPFYNVMLKDDKTYPWICIKNEDFPRIFLTRNVI
KDGSEYYGPYAKVRPAKILLDTIKHIYKLRTCNLNLSPAKIADGKYKVCLEYHIKNCEGP
CEDLESKEDYDEKIEAIRGIIKGDFRKAKEYLVNQMMKHASNLQFEEAQIIKERLDILED
YQAKNTVVNPNIDDVDVFGMTSDETAAYVNFFKIRNGNIIQSFTTEIKKILEETDEDIME
EALIEIRQKFGSDSKEVLLPFHLSVEIPNVKLIVPKVGDKKRIVELSEKNAKEYRLEKLK
QVQIVDPERHTNRIMAEMQKLLRMPVEPRHIEGFDNSNIQGTNPVSACVVFKDGKPSKAD
YRIFHPKTVEGPNDFATMEEVIYRRYKRMLDEGENLPQLILIDGGKGQLSSAVKSLRLLG
LYGKITIVGIAKRLEEIFFPEDPIPLYLDKKSETLKILQRVRDEAHRFGVKHHRTRRKNS
TIKSELEEIPGVGEKTIELLLSKLKSVKRIKEANQETLEEILGKSKAKVIWEFFNTNG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttctttagaattacaactcaaaactttaccttccgaacctggtgtttatcgt
tattatgataagaacgaacaacttctgtatgttggaaaagctaagaatttaaagaaaagg
gttctctcctatttcaataaaaatctttcaggatacaggatcaaaattatggtcggcaag
atccaacgcctagaaactacgattgtaaatagtgagtatgacgctcttttgctggaaaac
aatctgattaaggagcatcagccattttacaatgtcatgctgaaggatgacaaaacctat
ccttggatctgtattaaaaatgaagattttccaagaattttcttaaccagaaatgtcatt
aaagatggttcggaatattatggtccgtatgcaaaagtaagacctgccaagatattactg
gatacgatcaaacatatttataaactcaggacctgcaatctgaatctttcaccggccaaa
attgcagatggaaagtataaagtctgtctggaatatcatattaaaaattgtgaagggcct
tgtgaagatcttgaaagcaaagaagattatgatgaaaagatagaggccatccgtggaatt
attaaaggagatttccgtaaggcaaaggagtatctggtgaatcaaatgatgaaacacgcc
tccaaccttcagtttgaagaagcacagattattaaggaaagactagatattttggaagat
tatcaggctaaaaacaccgtagtcaatccaaatattgatgatgtggatgtctttggtatg
accagtgatgagacagctgcctatgtcaacttctttaaaataagaaacgggaatatcata
cagagcttcaccaccgaaatcaaaaaaatcctggaagagaccgatgaggatattatggaa
gaggctttaattgagatccggcagaaatttggttcggattcaaaagaagtattgcttcct
ttccatttatctgtagaaattccaaatgtaaaacttattgttcctaaagttggtgataaa
aagagaatcgtagagctttccgaaaagaatgcaaaggaatatcgtttggaaaaattaaaa
caggttcagattgttgacccggaaagacatactaacaggattatggcagaaatgcagaaa
cttcttagaatgcctgttgagccacgacatattgaaggatttgacaactcgaatatccag
ggaaccaacccggtttcggcctgtgtagtttttaaagacggaaaacccagcaaagcagat
tacaggattttccatcctaaaactgtagaagggcctaacgacttcgccacaatggaggaa
gttatctaccgccgatataaaagaatgctggacgaaggtgaaaatctgccacaactcatc
cttattgatggtggaaaaggacaattatcttctgctgtcaaaagtcttagactactagga
ttatatgggaaaattaccatcgtaggaattgcaaaaagacttgaagagattttcttcccg
gaagatcctattccattatatcttgataaaaagtctgaaactttaaaaatcctgcaaaga
gtaagagatgaagctcaccgattcggggtaaaacatcacagaacgagaagaaaaaattct
accatcaaatcagaattggaagaaattcctggcgtgggagaaaaaacgatcgaactgctt
ctttccaaacttaagtctgtaaaaagaatcaaagaagccaaccaagaaaccttggaagag
atcttaggtaaaagtaaagcgaaagtgatttgggagtttttcaataccaatgggtaa
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