Chryseobacterium capnotolerans: H5J24_19885
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Entry
H5J24_19885 CDS
T08205
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ccao
Chryseobacterium capnotolerans
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccao02000
]
H5J24_19885
Transporters [BR:
ccao02000
]
Other transporters
Pores ion channels [TC:
1
]
H5J24_19885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
EF-hand_8
Motif
Other DBs
NCBI-ProteinID:
UHO37841
LinkDB
All DBs
Position
complement(4280013..4281515)
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AA seq
500 aa
AA seq
DB search
MKNLKLGISALALTVASTVFAQTTNNPWLIGVGAHAENHKAAQTSFSNTFSANNLTKRMF
NLNNFSITPPLSKLTVARNVGKGLVIDWQTSVGNVENKRFNMGKEFFLMTGLGFQAHGAG
LLWNEESWFDPYLRVGANYLRHDYTSLSFPRNDYKGESVPNGKDGNENGKANHFTVATGA
GANFWVTKNFGLGIQGDYVSTPGDKSTVANFWQASASILFRFGNRDRDKDGILDKDDLCP
DTPGLPEFQGCPDTDGDGVPDKDDQCPDVAGPVENNGCPWPDTDGDGVIDKDDACPTVAG
PAENKGCPWPDTDGDGILDKDDACPTVPGLPEYNGCPKPKTVTAKDVETKLGSVFFDFNK
ATIKAESKPALDQAAEIIKKDGGHYLLEGRTDAKGAAAYNLKLSRQRAASVVAALDTRGV
DANALKSIGVGSAKATIPAKATDAERQVDRKVVVTAIEDDAQWNALKKRDYDDPTPVKVK
KATKKGGKKAPAKKVVKKKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaaaattaggaatttcagcattggcgcttactgttgcctctactgtcttt
gcccagactaccaacaatccgtggttgatcggagttggtgctcatgcggaaaaccacaag
gcagcacagacaagtttcagtaatacgttctctgctaataatctaacgaagagaatgttc
aatttgaacaacttctctattacacctccattatctaagttaacagttgctagaaacgtt
ggtaaaggtttagttattgactggcagacttctgttgggaatgttgaaaacaaaagattc
aacatggggaaagaatttttcctaatgacaggtcttggtttccaggctcacggtgctggt
cttttatggaacgaagagtcttggtttgacccttacttaagagtaggtgctaactattta
agacatgattacacttctctttctttcccaagaaatgactacaaaggtgaatctgttcca
aatggtaaggatggtaacgaaaacggtaaagctaaccactttacagtagctacaggtgct
ggtgctaacttctgggtaactaaaaacttcggtcttggtatccaaggagattatgtatca
actccaggtgataaatctactgttgctaacttctggcaagcttctgcttctatcttattc
agattcggaaacagagacagagataaggatggtatcctagacaaagatgatctttgtcca
gatactccaggtttaccagaattccaaggatgtcctgatactgacggtgacggagttcca
gataaagacgatcaatgtccagatgtagctggtccagttgaaaacaacggttgtccttgg
ccagatacagacggtgacggtgttatcgacaaagatgatgcttgtcctactgttgcaggt
cctgctgaaaacaaaggttgtccttggccagatacagacggtgacggtatcttagataaa
gatgatgcttgtcctactgttccaggtcttccagaatacaacggatgtcctaagcctaag
actgtaactgctaaagatgttgaaactaaattaggaagcgtattcttcgatttcaataaa
gctacaattaaagctgaatctaaaccagctctagatcaggctgctgaaattattaagaag
gatggtggtcactatctattagaaggtagaactgatgctaaaggtgctgctgcttacaac
ttgaaattatctagacaaagagctgcttctgtagttgctgctttagatacaagaggtgta
gatgctaacgctcttaaatcaataggtgtaggttctgctaaagctacaattccagctaaa
gctactgacgctgaaagacaagtagacagaaaagttgttgtaactgctattgaagatgat
gctcaatggaatgctcttaagaaaagagattacgatgatccaactccagtaaaagtgaaa
aaagctactaaaaaaggaggcaaaaaagctcctgcgaaaaaagtagttaaaaagaaaaaa
taa
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