Chryseobacterium capnotolerans: H5J24_20775
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Entry
H5J24_20775 CDS
T08205
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao00521
Streptomycin biosynthesis
ccao00523
Polyketide sugar unit biosynthesis
ccao00525
Acarbose and validamycin biosynthesis
ccao00541
Biosynthesis of various nucleotide sugars
ccao01100
Metabolic pathways
ccao01110
Biosynthesis of secondary metabolites
ccao01250
Biosynthesis of nucleotide sugars
Module
ccao_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H5J24_20775 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H5J24_20775 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H5J24_20775 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H5J24_20775 (rfbB)
00525 Acarbose and validamycin biosynthesis
H5J24_20775 (rfbB)
Enzymes [BR:
ccao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H5J24_20775 (rfbB)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UHO37992
LinkDB
All DBs
Position
4470024..4471103
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AA seq
359 aa
AA seq
DB search
MKNIIITGGAGFIGSHVVREFVKNNPESMIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKPEELRKVFEKYNPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWTLN
PDHTHGRFPDEKRTNLFYHVSTDEVYGSLGETGFFLETTSYDPQSPYSASKAASDHLVRA
YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINERPLPIYGDGKYTRDWLFVIDHA
RAIHQIFNDAKTGETYNIGGFNEWQNIDLVKELIKQMDAKLGKPEGYSEKLITFVKDRPG
HDKRYAIDANKLNKDLGWKPSVTFEEGLGKTIDWYLENKEWLENVTSGDYQKYYEKQYN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcattattacggggggagcaggattcatcggatcccatgttgtaagagaa
tttgtaaaaaacaatccggaaagtatgatcatcaatcttgatgcacttacttatgccggg
aatttagaaaatctaaaggacattgaaaatgagcctaactatgttttcgaaaaagcagat
atcacaaaaccagaagaactaagaaaagtttttgaaaaatataatccggatgcagttgtg
catttggcagcagaaagccacgttgacagaagtattactgatccaatggcttttatcaac
accaatgtaaatggaacagcaaatcttctaaacctttgtaaggagttctggactttaaac
ccggaccatactcacggaaggttccccgatgaaaaaagaacaaatctgttctatcatgtt
tccactgatgaagtatacggaagcttaggagagacaggatttttccttgaaacaacttct
tacgatcctcaatctccatattccgcttcaaaagcagcttcagaccatttggtaagagct
tatggaaatacatatggaatgccattcattgtatctaactgttcaaacaattatggacca
aaccatttcccagagaaattaattccactttgtatttctaatattattaatgaaagacca
ttacctatttacggagatgggaaatatacaagagactggctatttgttattgatcatgcg
agagctattcatcagatattcaatgatgctaaaaccggagagacttataatatcggagga
ttcaacgaatggcagaatatcgatcttgtaaaagaactgatcaaacaaatggatgctaaa
ttaggaaaaccggaaggttattctgaaaagctaatcacttttgtaaaagacagacctggc
cacgataagcgctatgctattgatgccaataaattaaacaaagatttaggctggaaacca
tctgtaacatttgaagaaggattaggaaaaaccatcgactggtatcttgaaaataaggaa
tggctggaaaatgtaaccagcggagattatcaaaaatactacgaaaaacagtataactaa
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