Chryseobacterium capnotolerans: H5J24_21215
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Entry
H5J24_21215 CDS
T08205
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H5J24_21215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccao02000
]
H5J24_21215
Enzymes [BR:
ccao01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
H5J24_21215
Transporters [BR:
ccao02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
H5J24_21215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA
AAA_22
AAA_18
nSTAND3
AAA_25
RsgA_GTPase
SRP54
AAA_16
DEAD
APS_kinase
AAA_5
AAA_23
AAA_29
ATP-synt_ab
AAA_15
AAA_30
TsaE
NACHT
AAA_7
AAA_17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UHO38065
LinkDB
All DBs
Position
4562899..4564737
Genome browser
AA seq
612 aa
AA seq
DB search
MNEYKKILRFARPHQKYIYGSLFFNILYSLFQIASLGTILPVLGMLFGTIKSEKQGTAPI
YSGEIVDFFSYAKEYSTYYIQSLVAEHGSLKVLAWLCIITAFMFLLRNIFRYLGALLLIN
YRVGVTKDLRGAMYRKILSLPVSFFTESRKGDMMSRMSNDVGEVEGSILGSLVELINAPF
MLISTLISLFIVSPEMTLFSLLVLPVMGTMIALIGKSLKKDSHEAQHELGNIFSIVDETL
KSSKVIKIFNAEKIMDNRFMQSMGRWISSSMSLGRKKELASPMSEFLGSITFLIIAWYGG
KQIIVDQSLSPAGFLVFLGMFFQILPPAKTLSTSISNVQKGEASLKRVLEILDADVKIEE
IAEPVSISTLNRNIEFKNIGFYYDKANLILKNFDLTIPKGKTVALVGQSGSGKTTIANLL
ARFYDVSEGQILIDGVDIKHLKLQEYRQLLGMVTQESVLFNDSVYNNILMGKPDATREEV
IEAAKIANADNFITGLSEGYETNIGDDGNKLSGGQKQRVSIARAVLKNPPIMILDEATSA
LDTESERFVQDALEKMMENRTSLVIAHRLSTIQKADWIVVMEKGTIVEQGTHHDLIAKKG
MYNKLVELQNFD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtataaaaaaattctgaggttcgcgaggcctcatcaaaaatatatctacgga
agtttatttttcaacattctgtattctttatttcagattgcttctctagggactatttta
cctgttttgggaatgctttttggcaccatcaaatcagaaaaacaagggacagcacctatt
tattccggtgagattgtcgacttcttctcttatgcaaaagaatattccacttactatata
caatctttggttgctgagcatggttctttaaaagttcttgcatggttgtgtatcattaca
gcctttatgttccttttaagaaacattttcaggtatttaggagcattactgcttatcaat
taccgtgtaggggttaccaaagatctacgtggggcgatgtacagaaagatattatcatta
cctgtgtcattttttacagaaagtagaaaaggagatatgatgtcccgtatgtctaatgac
gtgggagaggttgaaggaagcattctgggcagcttagttgagctaattaacgcccctttt
atgttgatcagtactttgatctctttatttattgtaagcccggaaatgactcttttctca
ttattggtacttcctgtaatgggaacaatgattgccctgattgggaaaagccttaaaaaa
gattctcatgaagcacagcatgaattgggaaatattttctctattgtagatgaaaccctg
aaatcttcaaaagtaattaagatatttaatgcggagaagatcatggataaccgttttatg
caatctatgggtagatggatttcaagctcaatgagtttgggaagaaagaaagaattagca
tcgccaatgagtgagtttctaggatctattaccttcctgattattgcatggtatggagga
aaacaaattattgttgaccaaagtttatcgcctgcaggctttctggtattcttaggaatg
ttcttccaaatcttacctccggcaaaaaccttatcaacatctatttccaacgtacaaaaa
ggggaagcatctcttaaaagagtactggaaatccttgatgctgatgtaaaaattgaagaa
attgcagaaccagtttctatctcaacactgaacagaaatatcgagttcaagaatattgga
ttctactatgacaaagctaatctgatccttaaaaactttgatttaacgatccctaaagga
aaaaccgttgcattggtaggacaaagtggtagtggaaaaactacaattgctaacctttta
gcaagattctatgatgtttctgaaggacaaatccttattgacggtgtagatatcaaacat
ttaaaattacaggaataccgccagcttctgggaatggtaacccaggaatctgtattattt
aatgattctgtttataacaatattctgatgggtaagcctgatgctaccagagaagaagtg
attgaagcagctaaaatcgctaatgcagacaactttattactgggctttctgaaggatat
gaaaccaatatcggagatgatggaaacaaactttccggaggtcagaaacaaagagtttct
attgcaagagcggtactgaaaaatccaccaattatgattctggatgaagctacttcagct
ttagatacagagtctgaaagatttgtacaggatgctctggaaaaaatgatggaaaacaga
acttcgcttgtgattgctcacagactttcaaccattcaaaaagcagactggattgtagtt
atggaaaaaggaaccatcgtagaacaaggaacccaccatgatcttattgctaaaaaagga
atgtacaataagcttgttgaacttcaaaattttgactaa
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