Chryseobacterium capnotolerans: H5J24_22360
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Entry
H5J24_22360 CDS
T08205
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H5J24_22360 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_22360 (mutS)
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
H5J24_22360 (mutS)
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GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
UHO38260
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Position
complement(4818150..4820738)
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AA seq
862 aa
AA seq
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MAKTKKETPLMTQYNTIKGKYPDALLLFRVGDFYETFGQDAVKTSQILGIVLTKRNNGEG
SVELAGFPHHSIDSYLPKLVRAGMRVAICDQLEDPKMVKGIVKRGVTELVTPGVTFNDQV
LNSKKNNFLLSLHKEKEKYGIALVDISTGEFLVSEGNLEKLLHIINTFDPSEIIFQRSAQ
IPEQIKNKNAFKLEDWAFQYNFAYEKLTSHFKTNSLKGFGVETLPLAITAAGAIFAYLVE
DTHHNLLSHITKLQIIPQEDYLMMDNFTLRNLEIVYPSNPQGKSLLDIIDKTSTPMGGRL
LRRRIILPLKSVDEIARRLSLIDFLNENDHLKYEIGQLLKSISDLDRLMGKLAAEKISPR
EFGHLRQSLINIHTIKALLHPHADVLAWLEPLFDLEELIKFLQNHLNEELPVSLAKGNVV
KDGVSEELDRLRNLQNKGRGFLDEMCQREIERTGITSLKIDFNNVFGYYIEVRNTHKDKV
PDDWVRKQTLVNAERYITEELKEYESQILGAEEKISILENQLYRNVCSETMVYIDQIQGN
SNIIAQIDVAAGLSELAVSESYTKPILNDGYAIDLKEARHPIIENALPLGEKYIPNDIFL
DKDSQQIIMVTGPNMAGKSAILRQTAIVCLLAQIGSFVPAKHAEIGLLDKIFTRVGATDN
ISAGESTFMVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHSTQA
KTLFATHYHELNEMTVNFERVKNFHVSIQENKGNIIFMRKLVPGGSEHSFGIHVAKLAGM
PAKVVNRANEILKTLEASRTQEGGASENIKRVTEENMQLSFFQLDDPVLENIREELTKID
INTLTPIEALMKLNAIKKMIGG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacgaagaaggaaaccccgttaatgactcaatataataccatcaagggcaaa
taccctgatgcacttttacttttcagagtaggggacttttatgaaacttttgggcaggat
gccgtgaaaacctctcagattttgggaattgttcttacgaaaagaaataatggagaagga
agtgtagaattagccggatttccacatcactctatagattcttatctaccaaaattggta
agagctggaatgagagttgcgatctgtgatcagttggaagatcctaaaatggtcaaagga
attgtgaaaaggggggttacagaactggtaactccaggagtgacttttaatgatcaggtt
ttaaattctaagaaaaataacttcctgctttctcttcataaggaaaaagaaaaatatgga
attgctttggtggatatttctaccggagagtttttggtaagcgagggcaaccttgaaaaa
ttgctgcatattattaatacttttgatccgagtgaaattattttccagagaagtgcacag
ataccggagcaaattaagaataagaatgcttttaaactggaagactgggcttttcaatac
aattttgcctacgagaaattaaccagccattttaaaacgaattcattaaaagggtttgga
gtagaaacccttccattagccattacagcagccggagctatttttgcgtatctggtagaa
gatacccatcataacctgctttctcatattaccaaacttcagattattcctcaggaagat
tatctgatgatggataatttcaccttaagaaatctggaaatcgtttatccaagcaatccg
caaggaaagtcattgctggatattattgataaaacctcaactccgatgggaggaagattg
ctgagaagaagaattattcttcctttaaaatctgtagatgaaattgcaagaagactttca
ctgattgattttttaaacgagaacgatcaccttaaatatgaaataggacaactgttaaaa
tcaatttctgatctggatcgattgatggggaaactggccgcagaaaaaatctcaccaagg
gaatttggacacctgcgtcagagtttaatcaatatccatacaatcaaagcattattgcat
cctcatgcggatgtactggcatggttggaacctttatttgatcttgaagaacttattaaa
ttcctgcagaatcatctgaatgaggagcttccggtaagtctggccaaagggaatgtagta
aaagacggggtttctgaggaacttgacagattgagaaatcttcaaaacaaaggccgtggg
tttcttgatgaaatgtgtcagagagagattgaaagaacaggtattacaagccttaaaatt
gatttcaacaacgttttcggatactatattgaagtccgaaatacccataaagataaagtt
ccagacgattgggtaagaaaacaaactctagtaaatgctgaacgatacataaccgaagaa
ttaaaggaatatgaaagccagattctgggggctgaagagaagataagcattctggaaaac
cagttgtacaggaatgtgtgctctgaaacgatggtttatatcgatcagatccaagggaac
tctaatattattgcacagattgatgttgctgcgggactgtctgaattagcagtttcagaa
agctataccaaacctattttgaatgacggttatgcaattgatctgaaggaagcaagacac
ccgattattgaaaatgcacttccactaggagaaaaatatattccgaacgacatcttcctg
gataaagattctcagcagatcatcatggtgacaggtccgaacatggccggtaaatcggca
atcctgcgtcagacggctatcgtttgtcttctggctcagataggaagctttgtccctgct
aaacatgctgaaatcggactattggacaagatctttacaagggtaggggctacggataat
atttctgccggtgaatctacattcatggtagaaatgaatgaagcagccaatatcctgaat
aatatatcagaacgaagccttatccttttagatgaaattgggcgtggaacttctacttat
gatggggtctccattgcatgggctattgcagaatatcttcatcagcactctacacaggcg
aagactttatttgccacccattatcatgaattgaatgaaatgaccgtgaatttcgaaaga
gtaaaaaacttccacgtttctattcaggaaaataaagggaatattatcttcatgagaaaa
ctggttccgggtggtagtgagcatagtttcggaattcatgtagctaaactggcaggaatg
cctgcaaaagtagtcaacagagccaatgagattcttaaaacgcttgaagcaagccgaact
caggaaggaggagcctcagaaaatatcaaacgggtaactgaagaaaatatgcagctttct
ttcttccaacttgatgatccggttttggaaaatattcgagaagagcttaccaaaatagat
atcaatactttaacaccgattgaagctttaatgaagctcaacgccataaaaaaaatgatt
ggaggataa
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