Chryseobacterium capnotolerans: H5J24_23510
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Entry
H5J24_23510 CDS
T08205
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5J24_23510 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccao03400
]
H5J24_23510 (uvrB)
DNA repair and recombination proteins [BR:
ccao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5J24_23510 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H5J24_23510 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_5
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
UHO38446
LinkDB
All DBs
Position
complement(5093751..5095742)
Genome browser
AA seq
663 aa
AA seq
DB search
MDFKLQSEYKPTGDQPQAIDKLTAGIEIGEKYQTLLGVTGSGKTFTVANLVQNVQRPTLV
LAHNKTLAAQLFMEFKEFFPENAVEYFVSYYDYYQPEAYIATTGTYIEKDLSINEEVEKL
RLSATASLLSGRRDVLIVASVSCIYGIGNPTEFHKSLISIAIGEKVTRTALLHSLVNALY
ARTLNEFQRGTFRVKGDVIDVFPAYTDNAIRIQFFGDEIEKIQSFDPVSGNVEDNFDQIQ
IYPANLFVTSKETLNGAIKDIQDDMVKQVDFFSSIGKPLEAKRLQERTELDLEMIKELGY
CSGIENYSRYLDGRLPGTRPFCLIDYFPKDFLMIIDESHVTVPQVHAMYGGDRSRKEALV
EYGFRLPAAMDNRPLKFEEFEAIQNQVVYVSATPADYELEKTGGAYIEQIIRPTGLLDPI
IEVRPSLNQIDDLMEEIQKRADADERVLVTTLTKKMAEELTKYFTKFGIRTRYIHSDVET
LERIQIMQDLRLGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGMLRSRRSMIQTVGRA
ARNINGKAIMYADKITKSMQATLDETEYRRAKQMKYNEDNGLVPKALNKKISENLVGRSK
DFPDEKYTQKEILQKVAEVKSTYASEDVEKMIEQKQKEMEAAAKNLDFIKAAKLRDEIAA
LKA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagcttcaatcagaatataaacccactggggatcaaccccaagctattgat
aaattaactgcaggaatagagattggtgaaaaataccagactcttcttggggtaacaggg
tccggtaaaacctttactgttgctaatcttgttcaaaacgttcaacgccctactctggtt
ctagcccataataaaacactggcagcacagctttttatggagtttaaagaattcttccct
gaaaacgccgtggaatactttgtcagctactatgattactatcagccggaggcttatatt
gctacaaccggaacttatattgaaaaggacctgagcattaatgaagaagttgaaaagtta
cgtctttccgcaaccgccagtcttctttcggggagaagagatgtgttgattgtggcttct
gtttcatgtatttatggtattggaaacccaacagaatttcacaaatcattaatttccatt
gctattggagaaaaagtaacgagaacagcattactccattctttagtgaatgctttatat
gcaaggacattaaatgaattccaaagaggaacattccgtgtaaagggagatgttattgat
gttttccctgcctatacagataatgccatcagaattcagttttttggagatgaaattgaa
aagattcaaagctttgatccagtgagcggaaatgtagaggataattttgaccaaattcag
atctatccggcgaatctttttgttacatcaaaggaaacactcaacggagctatcaaagat
attcaggacgatatggtaaaacaggtagacttcttcagctctatcggaaaacctttggag
gctaaacgacttcaggaaagaacagaattggatctggaaatgatcaaagagcttggatat
tgttctggaattgagaattattccagatatctagatggcagacttcccggaacaagacct
ttctgtctgattgattatttccccaaggacttcttaatgattattgatgaaagccacgta
accgttccacaggttcatgccatgtatggtggagaccgaagcagaaaagaagcattagta
gaatatggattcaggcttcccgcagcgatggataacaggcctttaaaatttgaagaattt
gaagctattcagaatcaggttgtctatgtttctgccactcccgctgattatgagctggaa
aaaacaggtggagcttatatagaacagatcatacgtccaacagggcttcttgatcccatt
attgaagtgaggccaagtttaaatcagattgatgatttaatggaagaaattcaaaaaaga
gctgatgccgatgaaagagttctggtaacgaccttaaccaagaaaatggcggaggaatta
acaaaatacttcacaaaattcggaatcaggacaagatatattcactctgatgtagaaacc
ctggagcgtattcagattatgcaggatcttcgtttagggctttttgatgttttgattgga
gtcaacttattaagagaaggattggacttaccggaagtttcattggtagcaattttagat
gctgataaagaaggaatgctgagaagcagacgatccatgatccaaacagtaggacgtgca
gcaagaaatatcaatggtaaagcaattatgtatgctgataagatcaccaaatctatgcag
gcaacattagatgagaccgaataccgccgtgccaagcagatgaagtacaacgaggataat
ggtttggtaccaaaagctcttaataaaaagatatctgaaaatctcgtaggaagaagtaaa
gacttcccggatgaaaaatatacgcagaaagaaattcttcaaaaagtggctgaagtgaaa
tctacctatgccagtgaagatgtagagaaaatgatcgagcagaagcaaaaagaaatggaa
gcggcagctaaaaatcttgattttattaaagcagctaagcttagggatgaaattgcagca
cttaaagcttaa
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