Cyprinus carpio (common carp): 109047714
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Entry
109047714 CDS
T05134
Name
(RefSeq) guanine nucleotide exchange protein smcr8a isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109047714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109047714
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109047714
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
109047714
NCBI-ProteinID:
XP_042576082
UniProt:
A0A8C1RQ38
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Position
B3:complement(20173629..20178343)
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AA seq
855 aa
AA seq
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MIGSPDVVAFTKEDDFGDSFSDPCSLPEEFSVPLFAHAANANPWTKTSFAKFSKDFILIS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMHQFQELSSGFSKASE
FLKLGNRKAFANELEKKLKDLEYTRSVLHKETELQKMNNGCYSTQAIEKANELANVEKSI
YEHKDLLRQITSYPSRKRKDVDFVQHETETPGDTSVIDDTLNINHSDKTVETESESRKSS
YTPQLIKGKSAKCFDKRLKTMEELCNASFFHQTLEQLNIIEKSFRGDLCLIYTSQIDRAL
LSKQSVTSFLFEAERDSEYGGTSKDFSISSNNPTVPILNLSGEPLSLESYTTCIDVDHVK
PGVESMEGRPESSTSDITQETSEAADTETKGSFSSDKSIEAFGGFSPSSLQANYFDGLER
KSKVSIASASENASGSVAVPQRTSDGNLVPMDAACCIGQDGFIFEEPLVELAQECCGDTV
VNQEPLSLLHGDPALQMDYILEESALAESPNMGLTFSELNTEEVAKITIEDVSDSTSFMS
ASTSSDRAASPFTYGSASTLKKKKKAGHSALRFIRQYPFAQQAIFCLLSGRTLVILGVDE
GTVRKLVNALFIFVPNLGKYGETVQPWLSSPFQLTDLQRWKLIGLQRAASPAGSSILHSL
NRYSRYISILDCDNKTLRCPPYKGTLVSHLADHRTQIKRGSTYFLHVQGMLTQLIAKAFL
YTFCHHIHLPMDINDQGSVTSRRTNFLLQLGYTVEESKIVQYLSELIKQHYIQGSSKGAN
QSFCFNYTTSYLYKI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccagatgtggtggcttttaccaaagaagatgactttggggactcgttc
tcggatccgtgctcacttccagaggagttttctgtgcctttgtttgctcatgctgccaat
gcaaatccctggacgaagacatcctttgcgaaattctcgaaagatttcatactcatctct
gaattttcagaacaggtcggtcctcagcctttactcaccattcccaatgatcccaaagtg
tgtgggacgtttgaccttaactacttctcacttcgcatcatgtctgtggactaccaggcg
tccttcgttgggcatcctcctggcagcaactacccaaagctaaattttgtggaggactca
aaagttgtcctgggtgattccaaggaaggggcgttcgcttacgtccatcatctgacgctg
tacgacttggaggcgcgtggatttgtgcgccccttttgcatggcctacatttccgcggac
gaaaggaagatcatgcatcagtttcaagaactgtcgtccgggttttccaaggcttccgaa
tttttaaaactaggcaacaggaaggcttttgcgaacgaactggaaaagaaactgaaagac
ctggagtacaccagatcggtgctgcacaaagagactgagctgcagaaaatgaacaatggc
tgttactccacacaagctattgagaaggcgaatgaattggccaatgtggagaagtccatc
tacgaacacaaagatctgctgaggcaaataacatcttatccgtccaggaaaagaaaagat
gtagattttgtacaacacgagacggagacaccaggtgacacgagtgtaatagacgataca
ctaaatattaatcattctgataagactgtggaaaccgaaagcgagagtagaaagtcctct
tacacgcctcagctcataaagggcaaatctgcgaagtgctttgataaacgcttgaaaacg
atggaagagctctgcaacgccagcttcttccaccaaactctagagcaactaaacataatt
gagaagtcattccgaggagatctgtgccttatttacactagccagatcgacagggccctt
ctgagcaaacagagcgttactagcttcctcttcgaagctgaacgcgactcggagtacgga
ggaacctcaaaggacttcagtatttcttccaacaacccaactgtccccattctgaactta
tctggcgagccgctgagtctcgaatcgtacaccacctgcatagatgtagatcacgttaag
ccaggtgtggagtctatggaagggcgtcccgagtccagtacgtctgacattacgcaggag
acctcagaggcggccgacacggagaccaaagggagtttcagtagcgacaagagcatcgag
gcttttggaggttttagtccttccagtctacaggcaaattactttgatggtctggaacga
aagagcaaggtatccattgcatcagcatctgaaaacgcatccggctctgttgctgtccct
caaaggacgtctgacgggaatctagtcccgatggatgcagcctgctgtattggacaggac
ggtttcatttttgaggaacctttagttgagctcgctcaggagtgctgtggcgatacagtg
gtgaaccaggagcctctgtctcttcttcacggagaccctgccttacagatggactacatt
ctggaagagtcggccctcgcagaaagcccgaacatgggactgactttttctgaactaaac
actgaggaggtggcaaaaattactatcgaagatgtctccgacagtacgagcttcatgagc
gcctccaccagttctgaccgagcggcgtctccgttcacctacggcagtgcgtcgacgctg
aagaagaagaagaaagcgggtcacagcgctcttcgattcatcaggcaatatccgtttgcg
cagcaagccattttctgtcttctgagtggccggacgctcgttattttaggagtggacgag
ggcacggtgaggaagctagtcaatgctttgttcattttcgttcccaatctcggcaagtac
ggtgaaaccgtccaaccgtggctttcatcgccatttcagctcaccgacctgcagagatgg
aaacttattggattgcagagagctgcctccccggctggatccagcattctccactctttg
aatcgatacagccgttacataagcattttggactgtgacaacaagaccctccggtgtccg
ccatacaaaggaactctagtaagccatttggcagaccacaggactcagatcaaacgtggc
agtacctacttcctccatgttcagggtatgttgactcagcttatagccaaggccttcctt
tacacattctgccatcacattcaccttcccatggacatcaacgaccagggctcggtaacg
tcacgcaggactaatttcttgttgcagctcggctacactgtggaggagagtaaaatcgtc
cagtacctaagtgagctcatcaagcagcattacattcaggggtcctcgaagggggccaac
cagtctttttgttttaattacaccaccagctatttgtacaaaatctga
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