Cyprinus carpio (common carp): 109048144
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Entry
109048144 CDS
T05134
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04060
Cytokine-cytokine receptor interaction
ccar04672
Intestinal immune network for IgA production
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109048144 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109048144 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109048144 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109048144 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109048144 (cxcl12a)
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Chemokines
109048144 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Chemokines
109048144 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
109048144
NCBI-ProteinID:
XP_018921374
UniProt:
A0A9Q9ZAZ4
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Position
B13:20557075..20563521
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AA seq
99 aa
AA seq
DB search
MDMKVIVIFALMAVVIHAPVSNAKPISLVERCWCRSTVNTVPQRSIRELKFVHTPNCPFQ
VIAKLKNNKEVCINPETKWLQQYLKNAVNKMKKAQQQQS
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaagtgatcgtaatattcgctctgatggcggtcgtcattcatgcaccggtt
tcaaatgccaagcccatcagcctggtagagagatgctggtgccgttccacagtcaacaca
gtcccacaaagaagcattcgtgagctcaagttcgtccacacacccaactgccccttccaa
gtcattgccaaactgaagaacaacaaggaggtgtgcattaacccagagaccaaatggctg
caacagtacctgaagaacgccgtgaacaaaatgaaaaaagctcaacaacagcagagctaa
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