Cyprinus carpio (common carp): 109048399
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Entry
109048399 CDS
T05134
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109048399
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109048399
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109048399
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109048399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109048399
NCBI-ProteinID:
XP_042584658
Ensembl:
ENSCCRG00000044629
UniProt:
A0A9Q9WJP6
LinkDB
All DBs
Position
B7:42123677..42166937
Genome browser
AA seq
1982 aa
AA seq
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MCDERKMSETGAERNRDIKPRRSVRVYDCRPGSSAAPPRTVDISEADYSGFLRALRQEFS
LSTNETFVISTTDRGEIDAELYKELVDGKTLHLLKSMDQELTAATEERIEFLPHYHTLVQ
CGMYEYYASEGQKALPYAFAELIDNALSATAKNTGIRRIEIRLLFDESQGGPAVVVMDNG
CGMTSKQLNNWAVYRLSKFIRENDMKREETGYVRPDPVPRSLNSDISYFGVGGKQAVFYI
GQSVRMISKPAGSPDVHEFIMSKEDFERKEMNKEEIYSGFIRNRKPGDYSHVNGSEEQFL
RNIVTEEEGKESFTAVVITGVQQEHVTFLKHNYSLWTRELAHSYHYYIHGVDGNDQKKKK
INDHVSNIDIQISLLERSPRVPRVMNLREVDNDMQTLYINSSFSTFEFKATGAGDSLVEG
LIRYHPFLYDQETFPVDPYALGPSEDEDEDCVILNSEARGKRPIFECFWNGRLIPYTTVS
EFEWCARPKKVGAVPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDNNTIFTRVHN
GQELRVNIQREFTNWLKDCHERFDKQVMFQGFLGLTTRTDVATKRLQSPWAQFHTIKWDG
KTYKKGQCVKSVKTNPVFVGSIVKFLLYGEHEGDVYGTGGYVQIALEPKELYDELRIIPI
SKIDRLAAAATIKKKIGDELAKLPDQLRVTWPEGNAWTESEARPAGTPMGPIKVEILNKK
GDSMSRLPVTGTTKKLLIELKVIWHSPKGDVQTNSHIGVHSSKWEYWFKPMENLSKLGNY
TLRLQTLLSDNSASEWAGKTLPNHTLKFSIKEGEAVSFVLGIISSPVHVGVPFSIPLDFR
DEFDYPTQPPCDIKPQLECSSLQLHYEGIAIGTTCVIKNVRAMGKISHQNKMYTVKVHIP
GLKQDSQSLQIVLQPGPPHTLVVLPEDVLSVENRTPANFRVQVHDEYQNITTQPKLTVRC
QLLGAPDLPVDVVDCSNTGSGALLTKPLLLKTVNTEQILTAKFNIPNHRTVACVERQLRV
LPSSRISRLEIYRQEEGSDDVMVLQNAERIDWTAGDTLGSLRFRLYDEGNRLVSLRPKLT
SMIKVNWTADINAEELSQGKLPPLSVPSKAQREHFYHVSFHDQHTVNFSFIIVPRPDEPE
RLRVNLSESTVKMGEILSGNIYVEVVDQYGNKTDCLNADIVKTLSVSADGLDKSALAVEW
QASSGQFSVGRVRFVGGAPGPRELCFKYQDMKEFVRIEVTAGPPVQIKLLEKPEMPLQVV
NGQGLDAPLVVQLCDEWGNPSPDQRIEIMMKAVMPQLKIKSLISSQPVDSEGKACFVLET
ISGPKGVHQLEFLGSFGRKGIPGPVVKLNLIPDPNKPIELSVKYDTAATLHAGDIFPVFT
VIVISEEGTPVRNICPANLSMLLWKGTVSGSYPPSTASTLKCSKRKDTEKDDCFCFRDKQ
IPELAGQYVVQFVLALDETKHLWSKQTPLNVVANKAVKLAPEAPPSTPVVSNSSNRTNRT
LLDSFSLKIMDQYSNAAGERLDGKVIVAVKSTGDVVLPLFENGERSVSYSLTNGETLITD
LALLENSPGVDGAEYILQFSPEIHQKSVPITPYILPFRFCNDAERQKVVVSLSKKKDRLS
QTVLMYREFFDTNKQLTSELECQVRDATHKLNELKPELMKCGLDVSGLTTVSTIEEVIND
KKAILTKIENQPRRKCSISDPFKGSPQVLGKVGHLALVEDDDAAKVISWHLLGDMDCVVT
ETTSAAKRIYDDTQGRQQVIPLETVFWRPNDRPLPHIRNGSPLFRPVGNPVFVKDMLIFP
EHVESCNKVFTSLLGDTILIDDLDSANHYRRGVVQNKMQCPTLLTRQGERIRSNGKFGGL
QNKAPSIEKLRGQVFGAPLPKEHNRIHHQIELLQQCRVAMQKASEVRVEYNSHLQYLQSP
EMKQKQQDLQQQELELRELEDTLASTPTRPYAVRVKRILEPETLESSVPSKRSRRKTRKL
DS
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgaaaggaagatgagcgagaccggagcggagagaaaccgggacataaagcct
cggaggtcggtgcgcgtgtatgactgcagaccggggagcagcgccgcgccgccgcggacc
gtcgacatctcggaggcggactacagcggcttcctgcgggctctgagacaggagttttca
ctgtcgacaaacgagacttttgttatcagcactacagaccgaggagagatcgatgcagaa
ctttacaaggagctggtcgacgggaaaaccttgcatctgttgaagtccatggatcaggag
ctgacggcggcgactgaagagcggattgagtttctgccgcactaccatactctggtgcag
tgtggcatgtacgagtactacgctagtgaaggacagaaggcgctgccctacgccttcgct
gagctcatcgataacgcgctgtcagccacggcaaaaaacacgggaatcaggagaattgaa
atcagattgctgtttgacgagtctcagggaggacctgctgttgtggtgatggacaacggc
tgtggaatgacatctaaacagctgaacaactgggccgtttaccgtctatccaagttcata
cgagaaaacgacatgaagagagaagaaaccggttacgtgcggccggatccagttccacgc
agtctgaacagtgacatctcgtattttggagtcggaggcaaacaggctgtgttttacatc
ggccagtctgtccgaatgatcagtaaacctgcaggctctccagatgttcatgagtttatc
atgtccaaagaagactttgagcgcaaggagatgaacaaggaagagatttactctggcttc
attagaaacaggaagcctggcgattactcacacgtgaatggaagcgaggagcagtttctg
cggaacattgtgactgaagaggaaggaaaggagagttttactgctgttgtcatcactgga
gtccaacaggaacacgtcaccttcctaaaacacaattacagtctgtggaccagagagctg
gcgcattcttaccattactatatacacggagttgatggaaacgaccagaaaaaaaagaaa
ataaatgaccacgtctccaacattgacattcagatcagtttgctcgagcgctctcctcga
gtcccccgtgtgatgaatctgagggaggtggataatgacatgcagactctgtatatcaac
tccagtttttccacttttgagttcaaagccaccggcgctggagattctttagtggaggga
ttgatccgttatcacccgttcctctacgatcaggaaacattcccagtggatccatacgca
ttaggtccttcagaggatgaggatgaagattgtgtaatcttgaactctgaagctcggggc
aagcggccgatctttgagtgcttctggaatgggcggctcattccctacaccactgtttca
gagttcgagtggtgtgcaaggcctaagaaagtaggtgcagtgccgctggagtgttataac
cggatatcaggagttctcttcgccaacgaccgattccaagtcagtaccaacaaacttacc
ttcatggacctggagcttcaactccgtgacaacaacaccattttcaccagagtgcacaat
ggccaggagctgcgggtgaatattcagagggagtttactaactggttaaaagactgtcat
gagcgcttcgataagcaggtgatgtttcagggatttctgggtttgacgactcgtacagat
gttgccaccaaacggcttcagtcaccctgggctcagtttcacaccattaagtgggacggc
aagacttacaagaaagggcaatgtgtgaagtcagtgaaaacaaaccccgtgtttgttggc
tctatagttaagttcttgctctacggagagcatgaaggagatgtgtacggcacaggagga
tacgtccagattgcactggaaccaaaggagttgtatgatgagctgaggatcattcccatc
tctaagatcgacaggctggctgcagccgcgaccattaagaagaaaatcggggatgagctc
gcaaaacttccagatcagctgagggttacgtggcctgagggaaacgcctggactgaaagt
gaagctcgtccggccggcacacccatgggtccaattaaagtggagattttgaacaaaaag
ggagactcgatgtctcgtctgcccgtgactggcactactaagaaactgttgattgagctg
aaagtcatctggcactctcctaaaggggacgtccagacaaactcccacattggtgttcat
tcatccaagtgggaatactggttcaagcccatggagaatctcagtaagcttgggaattac
acgctgcgtctgcagaccttgctgagtgacaactcggccagcgaatgggctggaaaaaca
ctccccaaccacaccctcaagttctccattaaagaaggtgaagcagtatcttttgttcta
ggtattatttcctctcctgtccatgtcggagttcccttcagtattcctctagattttagg
gatgagtttgattatcccacgcagccaccctgtgacattaaaccccagctggaatgtagt
tcactacagctacattatgagggaattgcaattgggaccacttgtgtcatcaaaaatgtg
agggccatgggaaagatctctcatcaaaacaagatgtacacagtgaaggtgcacatccca
ggactgaagcaggacagccagtctcttcaaattgtattgcaacctggccctccgcacact
cttgtggtgcttccagaagatgtgctctctgttgagaaccgaactccagcaaacttcaga
gttcaggttcacgatgaataccagaatatcaccactcagcctaaactcaccgtccgctgc
cagttgctgggagcccctgatctgcctgtggatgtcgtggactgcagtaacaccggctct
ggagccctgctgaccaaaccacttctgctgaagactgtaaacactgagcagatccttact
gccaagttcaacattcctaaccacaggacagtggcgtgcgttgaacgccagctccgcgtc
ttgcccagctcacgaatatcccgtttggagatctacagacaggaagagggctctgatgat
gtcatggtgctgcagaacgccgagcgcattgattggacggcgggagacacgctaggaagc
ctgcgcttcagactgtatgatgagggcaatagactggtgtcccttcggccaaagctcacc
agcatgattaaggtgaattggacggcagatataaacgcagaagagctttctcagggaaaa
ctgcctcctttaagtgtcccgtctaaagcacagagagagcatttctaccacgtgtctttc
cacgaccagcacacggtcaacttttccttcatcattgtgcctcgtccagatgagcctgag
cgtttgcgggtcaacctcagcgagtccactgtcaaaatgggagaaattctgtctggaaac
atatatgtagaagttgtagatcagtacgggaataaaacggactgtctgaacgctgatatt
gtgaagactttgagtgtgtctgctgatggtctggataaatcagctctggccgttgaatgg
caggccagcagtggacagttttctgtaggccgggtccggttcgtcggaggagctcctggc
ccgagggagctgtgctttaagtatcaggacatgaaggaatttgtgcgaatcgaagtcacc
gcgggacctccggtgcagataaagctgctggagaagccagagatgcctctccaggtggtg
aatggccagggcttggacgccccgctggtcgtgcagctgtgtgacgaatggggaaaccct
tcaccagaccagaggattgaaatcatgatgaaggctgtgatgccacagttgaagataaag
tctttaatatcatctcagcctgtggattcagaaggaaaagcgtgcttcgtattagaaact
ataagtggtccgaaaggggtgcatcagttggagtttctagggtcttttggcaggaagggg
attcctggacctgtagtaaaactaaacttgattcctgaccccaacaaacccatcgaactc
tctgttaaatatgacactgctgctaccttacatgcaggggacattttcccagtgtttaca
gtgatcgtgatttctgaggaaggcacgccggtgagaaacatctgcccggcaaacctctcg
atgcttctgtggaagggcacggtatcaggctcctatccaccctctaccgcctcgactctc
aagtgtagtaaacgcaaagacacagaaaaggatgactgcttctgcttcagggataagcag
attccagagcttgcaggacagtatgttgtccagtttgtgttggctttggacgaaaccaaa
catctgtggagcaagcagactccactaaatgttgttgccaataaagcggtgaaattagcc
cccgaggctccaccttcaactcctgttgtgtccaatagtagcaatcggaccaatcgcaca
ctgctggacagcttcagtctgaagatcatggaccagtacagtaacgctgctggtgagcgt
ttagatggaaaagtgattgttgcagtgaaaagtacaggagacgtggtgcttcctttgttt
gagaacggagaaagaagtgtgtcatacagcctcactaacggggagactctcattactgat
ttggcacttttggagaacagtcctggtgtggatggagccgagtacatcctccagttcagt
ccggagattcatcagaaaagtgttcccatcactccatatatcctgcctttcagattctgc
aacgatgcagaacgtcagaaagtcgttgtgagtctcagtaagaagaaagatcgcctttcc
caaaccgttttgatgtaccgggaattttttgataccaataaacaactaacatctgaactt
gaatgtcaggtgcgagatgcaacccacaaattaaacgagctcaaaccagagctcatgaaa
tgtggtttagacgtctcaggactaaccactgtatccacaatagaggaagttatcaatgac
aagaaagcaattttgaccaagatagagaatcagcctcggcggaaatgcagcatttctgac
cctttcaaaggcagcccacaggttctgggaaaggtgggtcacctggcactggtggaggat
gatgatgcagcgaaggtgatctcttggcatcttctgggtgacatggactgtgtggttact
gaaactacttctgctgccaagagaatctatgatgacacgcaaggacgacaacaagtcatt
cccctcgagacggtcttctggagaccaaatgacaggcctctgcctcacatcaggaatggc
tcgcctctcttccgtcccgttggtaatcctgtgttcgtaaaagacatgctcatttttcct
gagcacgtcgaaagctgcaataaagtttttacaagtcttcttggagacaccatactaatt
gatgacttggattccgctaatcattatcgccggggggtggttcagaataagatgcagtgt
cccacgctcttaacgcgtcagggagagcggatacgcagcaacgggaaattcggaggactg
cagaacaaggctccgtccatcgagaaacttcgaggacaagtatttggagcgccgttaccc
aaagagcacaaccgtatacaccatcaaatagagttactgcagcagtgtcgtgttgcaatg
cagaaggcctctgaggtccgggttgagtataacagtcatttgcagtacctgcagagtcct
gagatgaaacagaagcaacaagacctccagcagcaagagctagagttaagggaacttgag
gacacccttgccagcactcctacgcgaccgtacgctgtaagagtgaaaaggatccttgag
ccagaaacgctcgagtcctcagtcccttctaaaagatcccggcgcaaaacacgcaaactg
gattcatga
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