Cyprinus carpio (common carp): 109048582
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Entry
109048582 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109048582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109048582
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109048582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_4th
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_14th
Ig_NUP210_1st
Big_2
NUP210_Ig
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
109048582
NCBI-ProteinID:
XP_042569892
UniProt:
A0A9Q9VRK5
LinkDB
All DBs
Position
A23:complement(643782..672634)
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AA seq
1838 aa
AA seq
DB search
MKVNVLFILTSAFICSLTDSAKLNIPKVFYLLPEATKINFTLEATEGCYRWSSNRPECVS
VTGQVLRCDAIVDVISAIQIESTTRELHLEDSPLELKIHALDSEGNTLSTLASLLFEWTV
VKDAEMAGFPDSYNTLRVLRFAESAYTPPAYISEMERVGHQGDIILVSGIKTGHAKLKAK
IQEPIYKDVGAAEVRLLILENILLSPAYDVYLLAGTSIKYKVQKIRQGKITELSMPCDQY
ELHLQNGVVAPNGNPDAPVANLDRSSSTVFALQQGHTNIVLDHKSLGMQGAARLPNSTIY
VVEPGYLAFKIHPEDRWVLETGRKYEIFIEVFDKSGHKIYLSDNIRIETMFPTEYFEVLH
SSVNGSYHHVKALKRGQTVIDGTLKAVVDQAGSVHALSVPVHNEQDVEIYDPIVLTPAIL
TFPWQPKEGAYQYTIKVTGGSGNFSWSSTNSAVATVTVKGVMTTVRDVGVSGIYAHDMRN
PLHYGDMKVYVIEPVGMEFSPCVVEARVGLDLDLPLRIFGQLAGERVTLSDCSHFDMQVD
MESHGVFQLLQGRLPPGQGHCSGVRVKALTPGYTNLLVSHTHSNVHLSAKITIAAYPPLK
PIDPVSVAVVTLGSSKDMTFEGGPXPWVLEPSKFFRNLTAEDHSSVTLSLYGPASRTYSR
HLVRATCRALGEQVLAVTVGNQPTVTNPFPAVEPAVVKFVCAPPSRLTLTPIYLNPQLDV
SCPLLQQNKQVVPVSNYHNPELDVAAFDQQGRKFDNFSSLSMIWESSKVSLASIEPTMPM
QLHVHEDDNKQKKLHGYQTVLVHHESGVAAITVTAVGYQTSHLEAADVLSGFDPLSPVSA
TLDLLLVEDARVTPDTITIYNHPDVTADLILQQGSGYFYVNASVGGIADVTFQESQGIAQ
VVPAQAGVLQVMVHDLCLNFPSPATATVHISDILEVYVRVVDKVEIGKSVKAYVRVLDGN
KKPFLSKYFSVMNLKLRAASSIISLQALPDSSEEDTATFLVKGLVIGQTSVSAVVIDKHG
RKITSTPQQIEVFPPFRLLPRKVTLIVGAMMQITSEGGPQPQSNILFSLSHESIASVSSL
GHVKGLSVGNMSVTGVVQAVDTETGKLVVVSKDQVDVEVVQLKAIRIRAPITRMKTGTLM
PVYVMGLTSSQTPFSFGNALPGLTFHWSVTKRDILDVHTRHAEASVQLSAEHNFAMSVFG
KSKGRTGLRVVVKTSVPLAGHLQDSALELHDEIQIQVYEKLQLLNPEVQVEEILMSPNSL
LKLQTNRDGLGSLSYRVLDCPDRAALVQVDDKGHLTSGSLTGTASLQISSQETFGVNQTV
IIAVKVVTVSYLRLSTSPVMHTSNREAVSAIPLGAVLTFSVHFHDSTGETLHSHNSVLSF
STNRDDLVQVSKGSSNGTLTVRTVNVGLTLLRVWDSEQAGLVDFLALPVQHAIHPAGAQR
LVVGDVVCFSAQFVNQEGVSGVWSSSSSALLEIDPRTGAAVARDRGTVSVYYEIPGQLRT
YREVLIEGASQTSVLIPAVKKDRHPKVLMSTRNTGSNLIGSCSSSQSDSMALLHPESSVS
CQLRFTSSGVDFSPHDVYHTHTAFDASTGFYSCALSFKPMSDQQVKVLSLSMTEVEVRAG
VQGSVFSGEQLSARLPVSPGIYTDQTDIILSNQHPSAELTVYGPAAALQQLDVKSSSPAV
VIEEKEVSLSFPSYIRFTVRVVKPQGSLTASVSVSSTSSAQVLHIPVSVMHLAASSTSVQ
AHIADGVDGPSILQQFIDSYQVMFFTLFALLAATAVVIIVCHALFSPRDPLNHPAFIQKT
PPPAGVAKLTGSPFNSSMSSDMKGSPRLRLYSPNYNSR
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaacgtgctctttattctgacatctgccttcatctgcagtttgacagactcg
gccaaactcaatataccgaaggttttttacctcttgccagaagccacgaagattaatttt
acactggaagcaactgaaggatgttatcgatggtcgtccaacaggccggagtgtgtgtca
gtgaccggacaggtgctgcgctgtgacgctatcgtggatgtgatcagcgcgatccagatc
gagtccaccacgcgagagcttcatctggaggattcgccgctggagctgaagatccatgcg
ctggattcagagggaaacaccttaagtactctcgccagtctgctgtttgagtggactgtc
gtgaaggatgctgagatggcaggcttccccgactcctacaacaccctgcgggtgctgagg
tttgcggagtcggcgtacactcctcctgcctatatttctgagatggagcgagtgggacat
cagggagatatcatcctagtttcaggaatcaaaaccggccatgccaaactcaaagccaaa
atacaagaaccaatctataaggatgttggtgctgctgaggtcagattgctgattctggaa
aacatccttctgagtcctgcatatgatgtttatctgcttgctggcacctccatcaaatac
aaagtccagaaaattcggcaaggaaagattacagagctgtccatgccctgtgatcagtat
gagcttcaccttcagaacggggtcgtggcccctaacggaaacccagatgcccctgtggca
aacctggaccgcagcagctcaacagtgtttgcccttcagcagggacacaccaacatcgtg
ctggaccacaagagtctcgggatgcagggtgctgcccgacttcccaacagcaccatctat
gtcgtggagcctggatacttggcattcaagattcatcccgaggatcgctgggtcctggag
acggggaggaaatatgagatcttcattgaagtgtttgataagtcaggacacaagatttac
ctctccgataacatccgtatagaaaccatgttccctacagagtactttgaggttctgcac
tcgtctgtgaatggatcttatcaccatgtgaaagctctgaagcgcggtcagactgtcatt
gatggcacactgaaagcggttgttgatcaagctggaagtgtccacgcactctctgttcct
gtgcataatgagcaggacgtggagatctacgaccccatcgttctcactcccgccatcctc
acgttcccctggcagcctaaagagggagcgtaccagtacactatcaaggtgactggagga
agtggaaacttcagttggtcgtccactaactcagcagtcgccacggttacagtgaaaggc
gtgatgaccacggtcagagacgttggagtcagtgggatttacgcccatgacatgagaaac
ccgctgcactacggagacatgaaggtgtatgtgatcgagccagtggggatggagttcagc
ccgtgtgtggtggaggcccgcgtgggcttggatctggatctgccgctgcggatcttcggt
cagctggccggagagagagtgacactcagtgactgctctcactttgacatgcaggtggac
atggagagtcacggcgtctttcagctgctgcagggtagactgcccccaggtcagggccac
tgcagcggggtcagagttaaggctttgacccccggttacaccaacttattggttagccac
acccatagtaatgttcacctcagcgcaaagatcaccattgctgcctacccccctctcaag
ccgattgaccccgtgtctgtggcagtggtgacgttaggctcctctaaagacatgacgttt
gaaggaggccccnagccctgggtcctagagccttccaagttcttcagaaacctgacagct
gaggaccacagcagtgtcacgctgtctctgtacggacctgcctcacgtacatactccaga
catttggtcagagccacatgccgcgctctgggagaacaggtcttagcagtgactgttggg
aaccagcccaccgtgacgaaccccttccctgctgtggagccagctgtggtgaagtttgtg
tgcgcacctccgtcacgtctcacactgacgcccatctacctgaaccctcagctggatgtg
tcctgtcctctgctgcagcagaacaaacaagtggtgccggtttcgaattatcacaaccca
gagctggatgtggcagcctttgaccagcagggcaggaagttcgataacttcagctctttg
agtatgatctgggagtcctccaaagtttccctggcgagcatcgaaccaaccatgcccatg
cagctacatgtacacgaggatgacaacaaacagaaaaaactccacggatatcagacggtc
cttgtccatcatgaatcaggcgtggcagccatcactgtgaccgcagtcggctatcaaacg
tcccatctagaggcagcagatgttttgagtggatttgatcctttgagccccgtctctgcc
acgcttgacctgctgttagtagaggacgcgagggtgacccctgacaccatcaccatatac
aaccatcctgatgtgacggcggatctgattctgcagcagggctcaggttatttctacgtt
aatgcaagcgtcgggggaatcgcagacgtcacgttccaggagtcccagggaatcgctcag
gtggtcccggctcaggcaggggtcttgcaggtgatggttcatgacctttgcctgaacttc
ccttcccctgcgacggctacggttcacatctctgatattctggaggtttatgtgcgtgtg
gtcgacaaggtggagattggcaagtcagtcaaagcgtatgttcgggttttggatggcaac
aagaagcctttcctgtccaaatacttctctgtcatgaacctgaagctgagggccgcgtcc
tccattatatccctgcaagctctgcctgattcatcagaagaagatacagccacatttctg
gtcaaaggactggtgattggacaaactagtgtgtctgcagtcgtcatagacaaacatggc
aggaaaatcacctctacgccccagcagattgaagtatttcctcccttcagactactgccg
aggaaagtcactttgatagtcggagcaatgatgcagatcacgtcagagggaggaccacag
ccccagtccaacatcctcttctctctgtcccacgagagcatcgcctctgtcagcagtctg
gggcacgtcaagggcctgtcggtgggcaacatgagcgtgaccggcgtggtgcaggcggtc
gacacagaaaccggcaaactggtggtggtgtcaaaggatcaagtggatgtggaggtggtc
cagctgaaggccataagaatccgagctcccatcaccagaatgaagacaggaactctgatg
ccggtgtatgtgatgggcctgaccagcagccagacgccgttctcctttgggaacgctctt
cctggactgaccttccactggtctgtgacaaagagggacattctggacgttcacacgcgc
catgcagaggcgtctgtacagctcagcgctgagcacaacttcgccatgagtgtgtttggc
aagagtaaaggccgcacaggactgagggtggtggtgaagaccagcgttcctctggcggga
catctgcaggacagtgccctcgagctccatgatgagatacagattcaggtttatgagaaa
ctgcagctgttgaacccagaagttcaagttgaggagatactgatgtccccaaactccctg
ctcaaactccaaaccaacagagatggactgggctccctgtcctaccgtgtgctggactgt
ccggacagagctgctctcgttcaggtggatgataaaggtcatctgacttctggatctctg
acaggaactgcatcgctacagatcagctcacaggaaaccttcggcgtcaatcaaaccgtc
atcatcgctgtgaaggtggtgaccgtctcgtacctgcgtctgagcactagtccggtcatg
cacacgtctaacagagaggctgtgtccgccatcccgctgggagctgttctgaccttcagc
gttcatttccacgacagcacgggagaaaccttacacagccacaactctgtgctcagcttc
tccaccaacagggatgatttggtgcaggtcagtaagggttcgagtaacggcacgctgaca
gtgcggacggtgaatgtgggtctgactctgctgagggtttgggactcggagcaggccgga
ctcgtagatttcctcgcactgccggtccagcatgccattcatccggctggagcccagcgg
ctggtcgtgggagacgttgtgtgcttttctgcacagtttgttaatcaggagggtgtgtca
ggtgtgtggagctcgtcgtccagcgctctgctggagatcgatcccaggactggagcggca
gtagccagagacaggggcacagtcagtgtgtactacgagatccccggtcaactccgcacc
tacagagaggttctaattgaaggtgcgtctcagacgtctgtcctgattcctgcagtgaag
aaggacagacaccctaaagtcctgatgtcaaccaggaacacaggaagcaatctcattggg
agctgctcgtcgtctcagtcagacagcatggctctgctccacccagagtcctccgtcagc
tgtcagctccgcttcaccagcagcggcgtggatttctctcctcatgacgtctaccacact
cacacggcattcgacgccagcacaggtttctacagctgcgcactgagcttcaagcccatg
agtgaccagcaggtgaaggtgttgagcctgtctatgacggaggtggaggtgagggccggc
gtgcagggatcagtcttcagcggagagcagctcagcgcccggctgcctgtcagtccaggg
atctacaccgatcagacagacatcatcctgagcaatcagcacccgtctgctgagctgacc
gtctacgggccggcagccgctctccagcagctggacgtgaagagcagttctcctgcggtt
gtgatagaggagaaggaggtttccctcagctttcccagctacatcagattcacggttcga
gtagtgaagccgcagggatcgctgacggcgtccgtgtctgtgagcagcacgtccagtgct
caggtgctgcacatccccgtgtctgtcatgcatctagcagccagcagcacttctgtgcaa
gcacatatagcagatggagtggacgggcccagtattcttcagcagttcatcgactcctat
caagtgatgttcttcactttattcgctcttttggctgccactgctgttgtcatcatcgtg
tgccatgcactgttttccccgagagatcctctcaatcatcctgcattcatccagaagact
ccgccccctgcaggtgtagcgaagctgactggaagccccttcaacagcagcatgtcttca
gacatgaagggaagcccaagattgcgcttgtattcaccaaactacaactccagataa
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