Cyprinus carpio (common carp): 109051440
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Entry
109051440 CDS
T05134
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109051440
04621 NOD-like receptor signaling pathway
109051440
04622 RIG-I-like receptor signaling pathway
109051440
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109051440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Crescentin
Sina_ZnF
zf-RING_UBOX
zf-TRAF_2
RING_XB3-XBAT31
zf-rbx1
BLOC1_2
FlaC_arch
Fez1
zf-RING_6
MscS_porin
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109051440
NCBI-ProteinID:
XP_042630501
Ensembl:
ENSCCRG00000012605
UniProt:
A0A8C2GCF7
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All DBs
Position
A17:complement(28799235..28811034)
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AA seq
573 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRHEPGFLPMHGGFRDRFVTTPEAKYCCESCG
LVLCNPRQTECGHRFCESCITDLLSKPNPVCPADVEPLFEDKIFRDVCCYREIMALKVYC
RSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLSRKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVACPNQCSFSSILRSELSIHQHDCPKAQVTCSFIRYG
CSFKGLNQEMREHESSFASEHLRMMVVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQNEEMREKIRQLEQKVVSVQMLMSTHSEKMLEVEMELRELRPLRVMREEVEALRGSVE
SMRSIVASLDSGRVGSSSGSHTLGSLEQQLTRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVVSKNLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTVEMNIASGCP
LFVAQTVLENGTYIKDDSIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggcccaggcacgagccgggtttcttgcccatgcatggc
ggcttcagggaccgatttgtcacgacgcctgaggccaagtattgctgcgagtcttgcggg
ctagtgctctgtaaccctcgacaaactgagtgtggacaccgcttctgcgagagctgcatc
acagacttgctcagtaagcctaacccagtatgcccagctgatgtagaaccactctttgaa
gataagatattccgggatgtttgctgctatagggaaattatggctctgaaggtctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccatttg
gaagtttgtccgtactttgaggtgccgtgccccttgggaaagtgcaaggagaagatgatg
aggaaagacatgtctgagcacttgagccgcaaatgcaaacacagagagataacctgtgaa
ttctgcaatcacaagatggccctgactgagttacagaaacacaaagatacagtctgtcct
gcatttcctgtagcatgccctaatcagtgctcattttcttccattctaagaagtgagcta
tccattcatcagcatgactgtccaaaggcccaggtgacctgctcatttattcgctacgga
tgctcctttaaggggctgaatcaagagatgagggaacatgagtccagttttgcgtctgag
cacctgagaatgatggtggtcagaaacaccacactagaggccaaggtagaggatgttaag
agcgagctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgcagaggtt
gagactcagaatgaagagatgagagaaaagattaggcagctggagcagaaggttgtcagt
gtgcagatgttgatgagcactcactcagagaaaatgcttgaggttgaaatggagctgcgg
gagcttcgtcctctgcgagttatgagggaggaggtggaggctctgagagggtccgtggag
agcatgcgttcaattgtagcttctctcgattcgggtcgtgttggttccagttctggttct
cacaccctgggctccttggagcagcagctcacacgtcacgatgatatgatgagtgtccat
gacatccgtctggcagagatggacctgaagctgcaggtgttggagacggccagcttcaac
ggtacgctcatttggaagatccgtgactacaaaagacggaaacaggaagccgttgtctcc
aaaaacctctcgctctacagccagcccttctacacgggctattttggctacaagatgtgt
gcccgcgtctatctcaacggggacggaatgggtaaaggcacacatctctcgctctttttc
gtggtcatgcgcggggaatatgacgccttgctgccatggcctttcaagcagaaagtaaca
ttaatgttaatggaccaggggccggcacgaaaacacttaggtgatgccttcaaaccagac
cccaatagcagtagctttcgccggcccactgttgaaatgaacatagcctcgggctgtcca
ctctttgtggctcagactgtcctagagaatggaacctacatcaaagacgactccatcttc
atcaaggtgactgtagacacctctgacctcccagacccttga
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