Cyprinus carpio (common carp): 109052218 Help Entry 109052218         CDS       T05134                                  Symbol pcdh15a Name (RefSeq) protocadherin-15a   KO K16500   protocadherin-15 Organism ccar  Cyprinus carpio (common carp) Brite KEGG Orthology (KO) [BR:ccar00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccar03037]     109052218 (pcdh15a)    04515 Cell adhesion molecules [BR:ccar04515]     109052218 (pcdh15a) Cilium and associated proteins [BR:ccar03037]  Primary cilia and associated proteins   USH complex and associated proteins    109052218 (pcdh15a) Cell adhesion molecules [BR:ccar04515]  Cadherins   Protocadherins    109052218 (pcdh15a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Motif Other DBs NCBI-GeneID:  109052218 NCBI-ProteinID:  XP_042593358 UniProt:  A0A9Q9X180 LinkDB All DBs Position B13:complement(25152655..25326548) Genome browser AA seq 1721 aa AA seqDB search MRRRWWRSGCLGLAIGLFVIITQISAQNTEDWHYEECKLSRSGPPATIVTIDEESPNGTV LVENMQINGRAQDPDRTISLTLLDNYDYWVILDPALQRLYLNSTGRVLDRDPPSYITTIV VQVQCTNELVGTVILHEVRIVVRDRNDNTPRFQQPRYYVSVNELTPVGTTIFTGFSGNNG ATDIDDGPNGQIEYAIQYNPNDPMSNRTVRVSGTLSGNIVLAERLNYEERTRYLIIVQAN DRAPYPGTRRTATTTLTLDVSDGDDLGPMFLPCVLVNNTQDCNPITYRVAIPELTDPSKL NPLNVTPPIRATDQDRNIQPPSDRPGIMYFILVGQPATYAEFFSLNRSTAELRLLKPVDR ELYQRFNLVIKAEQDNGHPLPAYADLQIEILDENNQAPYFQRSSYQGFISESASVGTTIS GNANLTAPLGIIVLDNDIEETKDPQKNTTNNYNTTISTTTTTITTRYLTLLKPVDRETNY TLTLVASDGVQQSRPVMVDILVIDANDNTPTFSQVSYSVEIFTNMLPGETVLLLTALTPD SNLNGLITYAILAGDQGVFIINNRTGRITLAAGVTLTIGRSYALTVRASDNAPDTERRSS ITTVYIEVLPPNNQSPPRFPLQTYNLEISEAMRIGAILHNSQATDRELDPITYQIQSGDP QEVFNLSRTIGLLLLAKPLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDPSF DLTLLRNLTVREEAASVFVGQVRATDPDAGLNGQVRYRLLSFASLFTINAMGSIFTVVPL DRETRSQYDLIVEASDGAVDPRRTTITLLVEVTDINDNSPVFSQPIYTISIPENTPAGTV ILRLSAVDADLVSNVTYRIKTEEARQLFAVNRLTGAVSVLQALDFEDLAAGNSTYTFEVE ALDHGGVLPPGMATVIVRITDVNDFSPVFRHTLYKGLVAPNAEKGTVITTVLAEDQDPPG MPASKVRYRVDQDLSPYSGSIFDVETDTGRVITKVNLNEQPNAVFRLVIIAYDDGEPVKT DRTTVEITVLQPSRIPIFTEEEYRFSPVSESTPVGTPVGMILAAAVNTTVFYSIVSGNEG GEFMVNNRTGIIYTNKLLDYESVTSYVLHVQADSLAIILASLRAPSKTNTAKVFIDMQDE NDHPPVFTRSLYIGGVTEDTKTFTTVLKVVATDIDTGNYSKMAYRLITPPTPEGQDSFVI EPYTGVIKSAIMFRNMRRSYFKFEVIATDNYGQGLSGRANVVVSVVNALDMQVVVSNVPP TLVEENKEQLISILERYVQDQIPGAKVIVESISPRRHGEGYELEDYTKSDLQVYAIDPLT NRAISRQELFKFLDAKILDINKEFQLYLGEGGRILEIRSLDIVASVKKAAQAVGYTEGAL LALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPAGKLTGGGAPTNLYEEL GDGGIRRGFGREQQQQQLLRPSLLRPEALSMESGIDPGQDYYTQDYYSYDQGYDPYPPYG SRRRLITPMHDEYGEAIMEDEGYYYGGPEAGKKKRIKLVLDREHDTTSTEDSGPEVQRNR IPNISCHSNINGSVYLAQNGTIIRTRRPPYPNNLKLGSPTRLGKQFKKLDKLGVTHEEHL PLNGTEDNGPTMSTTTVHSYVTDHNLNSKECSVMGPNSIGPKSNIYKAHSEQDKGCCEQE SSVDNGEIKESVESPCEQTLSDEEELWMGPWNNLHIPMTKL NT seq 5166 nt NT seq  +upstreamnt  +downstreamnt atgaggaggcgctggtggcgatcgggctgtctggggttggcgattggcttgtttgttatc atcacccaaatctcggctcaaaacactgaggactggcactatgaggagtgtaagttgtca cggtcgggtccacctgccacaatcgtcaccatcgatgaggaaagtccaaatggtaccgtt cttgtggaaaacatgcagatcaacggtcgagctcaggatccagatagaaccatatccttg acgctgctggacaactacgattactgggttatccttgaccctgcgctgcagagactgtat ctcaacagcaccggacgagtgctggaccgagacccacccagttacatcaccaccattgtg gttcaggttcagtgcaccaatgagctggtgggaacagttattctgcatgaagtacggata gtggtgagggacagaaatgacaacacacctcgtttccagcagcctcgttactatgtatca gttaatgagctcactcctgtcggtaccaccatcttcaccggcttctcaggaaacaatgga gccacggacatcgatgacggaccaaacggacagatcgaatacgccattcagtacaaccca aatgacccgatgtcaaacaggaccgtgcgtgtttctgggacgctgtctggtaatattgtt ttggcagagcggctgaactatgaggagagaactcgctatctaattatagtccaggccaat gaccgtgctccgtatccgggaactcgtcgcacagcaaccactactctaactctggatgtc tcggatggagatgatctgggtcctatgttcctcccgtgtgttctggtcaacaacacacag gactgtaaccccatcacataccgtgtggctattcctgagctcactgacccgagcaaactg aaccctctgaatgtgacacctcccattcgagccactgaccaggacagaaacatccagcca ccctcagacagaccgggaatcatgtacttcatactggttggtcaacctgctacgtacgca gaattcttctcgctcaacaggagcacggctgagctgcggctgctgaagcctgtggacaga gagctgtaccagcgcttcaatctcgttattaaggccgagcaggataacggtcaccctctt cctgcatacgctgacctgcagattgaaattctagatgagaacaatcaggcgccatatttc cagcgttcctcgtaccagggcttcatcagtgagtctgcctcggttggcaccaccatctca gggaatgccaacctcacggccccgctgggcatcattgtactggacaatgacatagaagag acaaaagatcctcagaagaacaccactaataactacaacaccaccatctccaccacaaca actaccatcacaacacgctaccttactctactgaaaccagtggaccgagagacaaactac accttaacgctggtggcatctgatggcgttcaacagagcagacctgtgatggtggatatc ctggtcatcgatgcgaatgacaacacgcccactttcagtcaggtgtcctacagtgtggag atcttcactaacatgctgcccggggagaccgtcctgctgctgacagctctgacgcctgac tcaaacttaaacggcctcatcacatacgccatcctggctggagatcaaggtgtttttatc atcaacaaccgcacaggacgaatcacgttagcggcaggggtcacactgaccatcggccgt tcctacgcactgaccgtcagagcgtcagacaacgctcctgacacagagaggaggagttcc ataactacagtctacatagaggttctgccacccaacaatcagagtccaccacgattcccc ctacagacctacaacctggagatcagcgaggccatgaggataggagccatactgcacaat tcacaggctacagaccgtgagctggatcccatcacctaccagatacaaagcggtgacccg caggaggtcttcaacctttcacgaactataggtcttctgttgctggccaaacctctggac agagagaccattgaccagtatcgcctcatcgtcacagcatctgacggccacccaggaggg atttccacagccactgtcagcattgtcatcacagacgttaatgacaacgaccccagcttc gacctcactctactcagaaacctgaccgtgagggaggaagcggccagtgtgttcgtgggt caagtcagggccaccgatcctgatgccgggctcaacggtcaggtccggtatcgtttgctc tcctttgcgtctctgtttaccataaatgccatgggcagcatcttcactgtggtgccgctg gaccgagagacccggagccagtacgatctgattgtggaggcgtcagatggagcggtggac cctcgcaggaccaccatcacactgttggtggaggtgacagacatcaatgacaacagccct gtgttttctcagcccatctacaccatcagcatcccagaaaacaccccggctggaaccgtc atcctgagactcagtgcggtggatgccgatctcgtctctaacgtgacctacagaataaaa acagaagaggctcggcagctcttcgccgtgaaccgtctgaccggcgccgtatcagtcctg caggcgctagactttgaggatttggcagcaggcaacagcacctacacgtttgaagtggag gcgttagatcatggaggagtccttcctcctggaatggccacagtcatcgttagaatcacg gatgtgaatgacttctccccggtattcagacacacactttataaagggctggtggctcca aatgcagagaaagggacagtcatcacaactgtgcttgcagaagatcaggaccctccaggt atgcctgccagtaaagtgcgctacagagtggatcaggatctgtctccgtacagcggaagt atctttgatgtggagacggacacaggacgagttatcaccaaagtcaacctgaacgagcag cccaatgccgtcttcaggctggtgatcattgcctatgacgatggagagccggtgaagacg gacagaactacagtggaaatcactgtgcttcagccctccaggattcccatcttcactgag gaagagtacaggtttagtccggtgagtgagagcactcctgtcgggacacctgtgggaatg attctggccgcagccgtcaacaccactgtcttttactcaatagtgagcggaaatgaagga ggtgagttcatggtcaacaaccgcactgggatcatctacacaaataaacttctggactac gagagcgtgaccagttatgtgctccacgtgcaggccgactccctcgccatcatcctcgcc agtctacgcgctccttccaaaacgaacacggcgaaggtatttatcgacatgcaggatgag aatgatcatcctccggtcttcacaaggtctctttacatcggaggagtgactgaagacact aagaccttcaccacagtactgaaagttgtggctacagatattgacacgggaaactacagt aagatggcctacagactgatcaccccccccacacccgaggggcaggacagtttcgtcatt gagccgtacactggcgtcatcaagagcgccatcatgttcagaaacatgcgccggtcctac ttcaagtttgaggtcatcgccacagacaactatgggcagggattgagcggcagggctaat gtggtggtgtccgttgtcaatgccttggacatgcaggttgtggtgtctaatgtgccgccc actctggtggaggagaataaagagcagctgattagtattttggaacgctatgtgcaagat cagatccctggtgctaaagtgatagtggaatcgatcagtcctcgtcggcatggagaaggt tatgaacttgaggactacaccaaatcagacctgcaggtgtacgccatcgaccctctcacc aacagagccatctccagacaagagctcttcaagtttctggacgccaagattctggacatc aataaagagttccagctgtacctgggcgagggcgggcggattctggagatccgttctctt gacatcgtggcgagtgtgaagaaggctgcgcaggcggtgggctacacagagggggctctg ctggcactggccatcatcatcattctgtgctgcatccctgctattctcattgtcatggtg acgtacaaacaattcaaagagaggcaggccgagtgtgccaaaaccgcccgtatccagatg gctcttcctgccggaaaattgacaggaggtggcgctccgaccaatctctacgaggaactg ggagacggcggcatcaggcgtggctttggcagagagcagcagcagcagcagctgttgaga ccctctctgctccggcctgaggctctttccatggaatctggtattgatcctggacaggat tactatacccaagactactatagctacgatcaagggtatgatccctatccaccctacggc agccgcaggaggctgattacacctatgcatgatgagtatggagaggccatcatggaagat gaaggatattactatggtgggccagaggctggcaaaaagaagcgaatcaaactggtgttg gaccgagagcatgacacaacttcaacagaagacagtggaccggaagtccagcgcaatcgc atacccaacatcagctgccacagtaacatcaacggatcagtataccttgcccaaaacggt accatcatccgaacacgaaggcccccttaccccaacaacttaaaactgggctcaccaaca cgattaggtaaacagtttaaaaaactggacaagctaggtgtcacacatgaagagcattta cctttaaatggaacagaagacaatgggcctactatgagcaccaccactgtccattcctat gttactgatcacaaccttaactccaaagagtgcagtgtaatgggccctaacagcataggg cccaaatccaacatctataaagcccattcggagcaggataaggggtgctgtgagcaggag tcctcagtggacaatggggagattaaagagtcggtagagtctccatgtgagcaaacgctg tctgatgaagaggagctctggatgggtccctggaacaacttacacataccaatgacaaaa ctctga

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