Cyprinus carpio (common carp): 109052260
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Entry
109052260 CDS
T05134
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109052260
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109052260
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
109052260
NCBI-ProteinID:
XP_042583902
Ensembl:
ENSCCRG00000034475
UniProt:
A0A9Q9WI94
LinkDB
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Position
A3:28386242..28408813
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AA seq
1786 aa
AA seq
DB search
MASLLPPTGADVFHPFTLESLAEIERRMAEEAAEQEQMKAPNIEVPEEDLPKPSSDLEAG
KVLPFIYGDPPPNLLNVPLEELDPFYKAKKTFIVVTKGNTIYRFNAEPACYILSPFNPIR
RVAIRILIHSLFSMFIMITILSNCVFMTMSDPPAWNKIVEYVFTGIYTSEALVKVLSRGF
CIGDFTFLRDPWNWLDFMVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQAVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCIKSFDWSNSDNLTVLFNHTDI
NGTETANSTFNFQEYIDNPENYYYVPGHMDPLLCGNSSDAGKCPEGYTCLKAGPNPNYGY
TSYDNFAWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVV
AMAYAEQNEATIAEAKKKEEEYAKILEQLKKQAEQKNSMVNGSKTSLSSKKKGDDDQIQN
DYDGIALKPLSKSNGSKGSMNYLEVPNSQMRKPSAVSATDNALDELEDIQRPCPPCWYKF
ADIFLKWDCCLPWVKFKKFIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTQHFEHMLT
VGNLVFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSF
RLMRVFKLAKSWPTLNMLIKIISNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVC
KISEDCKLPRWHMTDFFHSFLIIFRILCGEWIETMWDCMEVAGQGMCIVVFMMVMIIGNL
VVMLNLFLALLLSSFSGDNLSASDDDGEMNNLQIAIARMTRGIDWVKAFVIGHFTQCLGL
KPKGEGVKANEEIDSKVATMNSSLSVIKVPIANGELDDDDDGNSSSEDEGKEDVDKNSKK
TDGDESSTCSTVDKPPEVVEVEEEEEEEEEDSTPEDCYTENCIRRCPCLELDVTQGKGKA
WWNFRKTCYSIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRVIKIILEYADLVFTYVF
VIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRP
LRALSRFEGMKVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNSTSEE
VFPITQVNNKSECLELTEADPNVRWMNMKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVD
SREVEMQPDYESNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTED
QKKYYNAMKKLGSKKPQKPIPRPTNCCQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETD
DQSEEKEYILFLINLVFIVLFTGECILKIIALRCHYFSIGWNIFDFVVVILSIAGLLLAD
LIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFI
FSIFGMSNFAYVKKEAGIDDMFNFETFGNSIICLFMITTSAGWDGLLAPILNSPPDCDPD
VENPGSPVRGNCGSAAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDD
FEMFYETWEKFDPTASQFIAYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVPDDKIHC
LDILLALTTQVLGDSDQMDAMKATMAEKFMDNNPSMVSFEPIISTFRQKQEEVAALTIQS
AYRKHVLKRGLKHASYMYREKTNSKRQGEEAPEKVGMIAKKMSHLYGDQAVEDNKPTSFS
FPQRGKPQYGVKRPPVRVQRDVVLHSAPFPTPDSSDAAEKLRESIV
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgctccctcccacaggtgccgatgtgttccaccccttcactttggagtcg
ctcgccgagatcgagcggcggatggcagaagaagccgccgagcaggagcagatgaaggca
ccgaatattgaggtgcctgaggaggatctgcccaaacccagcagtgatttggaagcagga
aaggtcctaccattcatctacggagaccctccaccaaatctcctcaatgttcctcttgaa
gagttggatccattctacaaagcaaaaaaaacgttcatcgtggtcaccaaagggaataca
atatacagattcaatgctgaacctgcatgctacattctaagtccattcaaccctattcga
cgagtggccataagaatactcatacattcattatttagcatgttcatcatgataaccatc
ttgtcaaactgcgtgttcatgacgatgagtgaccctccagcatggaataaaatagtagag
tacgttttcactggcatctacacctctgaggcgcttgtaaaggtgctgtccagaggcttc
tgcatcggtgatttcacattcctgagagatccatggaattggctggattttatggtcatc
accatggcgtacgtcacagagtttgtggacttggggaatatatccgctctgaggactttc
cgtgttcttcgggccctaaaaacaattactgtaattccaggtcttaaaaccattgttggt
gccttgattcaggcggtgaagaaattggcggatgtcatgatcctcactgtcttctgtctc
agcgtgtttgctctcattggcctgcaactgtttatgggaaatttgcggcaaaagtgcatc
aagtcttttgactggagcaatagtgataacctgaccgtgctcttcaatcacacagacatc
aatggcactgaaacagccaacagcacattcaactttcaggaatatattgacaatccagaa
aactactactatgtgcctggccatatggatccgttactttgtgggaacagctctgatgca
gggaagtgccctgagggctacacatgcctaaaagctggcccaaacccaaattatggctac
actagttatgacaattttgcatgggctttcttagcccttttccggttaatgactcaagat
ttctgggagaacttgttccagttgacgctccgtgcagcagggaagacgtacatgatcttc
tttgtagtcatcatcttcttgggttcgttctacctcatcaatctgattctggctgtggtg
gccatggcatatgctgaacagaatgaagccaccattgcagaagctaaaaaaaaggaggaa
gagtatgcaaaaatcctggaacagctcaagaaacaagctgagcaaaagaacagcatggtg
aatggcagtaagacatcattatccagcaaaaagaaaggtgacgatgaccaaattcagaac
gactatgacgggatcgcattgaaacccctctcaaagtcaaatggatccaaaggaagcatg
aattacttagaagtccctaactcgcagatgagaaaaccaagtgcagtgagcgctacagac
aatgctttagatgagctggaagatattcaaaggccgtgtcctccctgctggtacaagttt
gctgacatattcctgaaatgggattgctgcttaccatgggtgaaatttaagaagtttatc
taccttattgtaatggatccttttgtggatctgggcattaccatctgcattgtgctcaac
actctattcatggctatggagcactatcctatgactcaacatttcgaacacatgttgaca
gtgggaaacctggttttcactggtatctttacagcagagatggtgctaaaacttattgca
ctggacccatattattacttccaagttggctggaacatttttgacagcataattgtgacc
atgagtctggtggagttgggcttagccaatgttgagggcttatctgtgctgaggtccttc
cgtctgatgcgtgtgttcaagctggcaaaatcttggccaacactaaacatgctgataaaa
atcattagtaattctgtgggtgctcttgggaacctgacccttgtcctggccattattgtc
ttcatctttgctgtggtggggatgcagctttttggaaaaagctacagggactgtgtttgt
aagatctcagaggattgcaagctccctcgctggcacatgacagatttctttcactcattc
ctcatcatttttcgcattctatgtggggaatggatcgaaacaatgtgggactgcatggaa
gtagctggccaaggcatgtgcatcgtcgtcttcatgatggtcatgattataggaaatcta
gtggtgatgttgaatctcttcctggctctgctgctcagctccttcagtggagacaacttg
tcagcgtctgatgatgatggggagatgaacaatctgcagattgccattgctagaatgaca
agaggcattgactgggtaaaggccttcgttatcggtcatttcacacaatgtctgggcctg
aagccaaagggagagggtgtgaaagcaaatgaagaaattgattctaaggtggccaccatg
aattccagtctgtccgttatcaaagtgcctatagccaacggtgaactggatgatgacgat
gatggcaacagctcttctgaggatgaaggcaaagaagatgttgataaaaatagtaaaaag
acagatggagatgaatcatcaacctgcagcacagtggacaaacctcctgaggtagtagag
gtggaagaagaggaagaagaggaagaggaggactccacccctgaggactgctacacagag
aactgcatcaggcgatgtccttgtttggagcttgacgttacccaaggtaaagggaaggca
tggtggaatttccgtaaaacctgctactccattgtggagcatagctattttgaaaccttc
atcatcttcatgatcctcctcagcagtggagctttagcatttgaggacatatacattgaa
caacgaagagtgattaaaatcattcttgaatatgcagatctggtcttcacctatgtgttt
gtcatagagatgcttctgaaatgggtagcctatggattcaaggtctatttcacaaacgca
tggtgttggctggactttctcattgttgacgtgtccctgatcagtttgactgcaaatatc
ttaggctactctgaactgggggccattaagtctctcaggactttgcgagcgctgagacct
cttcgagctctttccaggtttgaaggaatgaaggtggtggtgaacgctctggtgggggcc
attccatccatcttcaacgttctcctggtctgcctgatcttttggctcatcttcagcatc
atgggagtcaacctttttgctggaaagttctactactgcttcaactcaacatccgaagaa
gttttcccaatcactcaggtcaacaataagagtgagtgcttggagctcacagaggctgat
ccaaatgtgcgatggatgaatatgaaggttacgtttgataacgtaggcatgggatacctc
tccttactgcaagtggcaacgttcaaaggatggatggacatcatgtatagtgctgtggat
tctcgtgaagttgaaatgcagccggactatgagtcaaacctctacatgtacatttacttt
gtcatcttcatcatttttggctctttctttaccctcaatctattcatcggtgtcatcatt
gacaatttcaaccaacaaaaggcaaagttaggaggaactgatatcttcatgacagaggac
cagaaaaaatactacaatgccatgaagaaacttggctccaaaaagccacagaaaccaatt
ccacggcctacaaactgctgccaaggtttggtatttgacctggtcaccaagcagttcttt
gacatcttcattatggtgatgatctgcctgaacatggtgaccatgatggtggagacagat
gaccagagtgaagagaaggaatatattctgttccttatcaacttggtcttcatcgtactc
ttcaccggggagtgcattctcaagatcattgccttgcgctgtcactacttttccatcggg
tggaacatttttgattttgtggtggtcattctttcaatcgcaggtcttttgctggcggat
ctcatcgagaagtactttgtgtcacctacgctgtttcgcgtcatccgactggccagaatc
ggccgtgtcctgcggctcatccggggtgccaaaggaatccggacgttactgttcgcactg
atgatgtcacttcctgccctcttcaacataggcttgcttctattcttaatcatgtttatt
ttctccatatttggcatgtccaactttgcgtatgtgaaaaaagaagcgggcatcgatgac
atgtttaatttcgagaccttcgggaacagtatcatatgtttgttcatgatcacaacatcc
gccggctgggatggattgttggcacctatactcaacagcccaccagactgcgacccggat
gtggagaacccgggatcgcctgtccgaggaaactgcgggagcgctgcggtaggcatcgtc
ttcttctgcagctacattgtcatgtccttcctcgtcgtggtcaacatgtacatagccatt
atcctggaaaacttcaatgtagcgacggaagaaagcagcgaccccttgtgcgaggatgac
ttcgaaatgttctatgaaacctgggagaagttcgaccccaccgcctctcagttcatcgct
tacagtaggctgtcagaattctgcgacacactgaaagaccccctgagaatcccaaaaccg
aacacccttaagttgatcacaatggaccttcccatggtccctgacgataagatccactgt
ctggacattctcctggccctcactacacaggtgctgggagattctgaccagatggatgcc
atgaaagcaactatggcggagaagttcatggacaacaatccctcaatggtttcgttcgag
cccatcatcagcactttcagacagaagcaagaagaagtggccgctttgaccattcaaagt
gcctaccgcaagcacgtcctcaaacgcggcctcaaacatgcctcatatatgtatagagag
aagacaaactcaaagagacaaggtgaagaggctccagaaaaagtggggatgatagctaag
aaaatgagccatctgtatggagaccaagccgttgaggacaacaaacctacaagtttctcc
ttccctcaacgtgggaaaccacagtatggggttaagcgtcccccagtgagagttcagaga
gatgtggtcttgcactctgccccttttcccactcctgactcctcagacgctgcggaaaaa
ttgagggagtccattgtgtaa
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