KEGG   Cyprinus carpio (common carp): 109052892
Entry
109052892         CDS       T05134                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109052892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccar03000]
    109052892
   04121 Ubiquitin system [BR:ccar04121]
    109052892
   03036 Chromosome and associated proteins [BR:ccar03036]
    109052892
Enzymes [BR:ccar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     109052892
Transcription factors [BR:ccar03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109052892
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     109052892
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109052892
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109052892
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD LRR_At1g61320_AtMIF1 Rubredoxin
Other DBs
NCBI-GeneID: 109052892
NCBI-ProteinID: XP_042585943
Ensembl: ENSCCRG00000015568
UniProt: A0A8C1MAW5
LinkDB
Position
B8:complement(19330696..19345187)
AA seq 867 aa
MAMSLSADDEDYDSDTAEQQRLPNRPKAKMAASTATTPAATASSSTATAVKLPSNRTSSG
ARRRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVC
GEAGKEDTLDDEDEKFNAMLMECSICNEIVHPNCLKVKDAAGVVNDELPNCWECPKCNYA
GKTGKACKQKRGPGFKYASNLPGSLLREQKAGRDGREEGDQTSTGASSIKRKSEREETPR
LKTEDLPSRLPPLLSPSGLPRPRSEVPNFLRKKRKLFDDDEEEEEASAKKKPKKPWRLEE
PLIPKLSNMKTEEEEDNSDEEEERQEKRELPRRSFKKDYSTVRKEEEHEEERREERDPPF
RSLKEFNTLRKEEDQEEEKEDDDEEEEENNNGKRGRDSSPALKNILSLESDASRCSSPRA
GPSSDGSETQEKAPRARAKRHRRKPPNRQLSAELSKQFNMEIRRTEHSLANENQQPLKSE
PEDSENEEPKKGLRNGTPGNGGGGVERGTGGEGGGERPHLRAREMNGTSWELRHFYPPQI
TPLGLNRSSPTVRPLPARSPPKCVQMERHVIRPPPICPPPDRLPLADGRNHIAPREAWLT
IFSHLSHRELCVCMRVCRTWNRWCCDKRLWTHIDLKRCKSITPLMLSGIIRRQPITLDLS
WTNISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDPQMR
DLLSPPTDNRPGQMDTRSKLRNVTDLRLAGLDITDSSLRLIIKNMPVLSGLDLSYCNHIN
DQSVNLLTAAGTTTRDSLTDVNLSVCNRVTDQSLSYFKRCGSICRIDLRFCKQVSRQACE
RFIAEMSVIVPFQLQEDKLLQKLHSTP
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggccatgtcactgagtgcagacgatgaggattacgactcggacacagccgaacagcaa
cggctacccaacagacccaaggccaaaatggctgcatcaacagcaacaactccggctgcg
accgcttcttcatccactgcaacagcggtcaagctgccgtccaatcggacctcctctgga
gctcgccgtagacgcacaagatgtcgaaaatgcgaggcatgtgtgcggacagaatgtgga
gagtgtcacttctgtaaggacatgaagaagtttggaggacctggtcgaatgaaacagtct
tgcattatgagacaatgtatagcgcccgtgttaccacatacagcagtgtgtgtagtgtgc
ggtgaagctggtaaagaagacacacttgatgatgaagatgaaaaatttaatgccatgctt
atggagtgctccatctgcaatgagattgtccacccaaactgcctcaaggtgaaggatgca
gctggggtagtaaatgatgagcttcctaactgctgggaatgtccaaaatgcaattatgct
gggaagactggaaaagcctgcaagcaaaaacggggcccaggctttaagtacgcatccaac
ctgccagggtccctgctgagggagcagaaagcaggacgtgacgggagagaggaaggggac
cagacatccacaggtgcttcatccattaagaggaagagtgagagggaggaaactcccaga
ctgaagactgaagatctaccatcccgtcttcccccactcttgagccctagtggcctgcca
agaccacgatctgaagtgcccaacttcttgaggaagaagagaaagttatttgatgatgat
gaagaggaagaggaggctagtgctaaaaagaagccgaagaaaccctggaggcttgaagag
cctttgattcccaaactctctaacatgaaaacagaagaggaggaagacaactctgacgag
gaggaagagaggcaagagaagcgagaactgcctcgtcgttcatttaagaaagactacagc
acagtaagaaaagaggaagagcatgaggaagagaggagggaggaaagagatccacctttc
agatccctaaaggagtttaacacactccggaaggaggaagaccaagaggaagaaaaggag
gatgatgatgaggaagaggaggagaacaataatggcaaacgaggcagggacagcagccct
gcactgaagaacattttatcgcttgagagtgatgcttcaaggtgcagctccccaagagca
gggccaagcagcgatggtagtgagactcaagagaaggcaccacgtgctcgggcaaagcga
caccggcgcaagccccctaaccgccagctcagtgcagaactcagcaagcagtttaacatg
gagatccgtcgcacagagcattcactggccaatgagaaccagcagccactcaagagtgaa
cccgaggacagcgagaacgaggaaccaaagaaaggcttacggaacgggactccagggaat
ggaggtggaggtgtagaaagaggcacaggtggagagggaggaggggagcggccacactta
cgagcaagggagatgaatgggacatcttgggagctgcggcacttttaccctcctcagatt
accccccttggcttgaaccgcagttcacctacagtcagaccacttcctgcacgttcacct
cccaagtgtgttcagatggagcgccatgtgatccggccacctccaatctgccctccacct
gataggctaccactagctgatggacgcaatcacattgctcccagagaagcatggttgact
attttcagtcacctgagccatcgtgaactctgtgtgtgcatgcgagtgtgccgaacatgg
aatcgctggtgctgtgacaagagattatggactcatatcgatttgaagcgttgtaagtcc
atcaccccactgatgctaagtgggataattcgcagacagcccatcactttggatctgagc
tggaccaacatctccaagaagcaattaagctggcttattaaccgattaccaggactaagg
gtgcttctcctatcaggctgttcatgggtggccgtttcagctctctgcacatccagttgt
cctctgctgcgtactctagacctgcagtgggtggaggggctcaaagacccccagatgagg
gacctactatctcctccgactgacaacaggccaggtcagatggacacacgcagcaaactt
cgtaatgttactgacctgcgtctggctggtttggacatcacggacagctctctgcgtctc
atcattaaaaatatgcctgtactctccggtctggacttgagttactgcaaccatatcaat
gaccagtcggtaaacctgctgactgctgcagggaccaccactagagactccttaactgat
gtcaacctttctgtgtgtaaccgggtcactgatcagtcgctgagctacttcaaacgctgc
ggaagcatctgccgtattgacctgcgattttgcaagcaggtgagccgacaggcgtgtgag
cgcttcattgctgagatgtcggtcattgttcccttccagctgcaagaggataaacttctc
caaaaacttcacagcaccccctag

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