KEGG   Cyprinus carpio (common carp): 109053708
Entry
109053708         CDS       T05134                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109053708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109053708
Spliceosome [BR:ccar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109053708
 Complex B
    109053708
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109053708
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 DUF2730 Usp
Other DBs
NCBI-GeneID: 109053708
NCBI-ProteinID: XP_018926574
Ensembl: ENSCCRG00000007800
UniProt: A0A9Q9V061
LinkDB
Position
B17:9896685..9900165
AA seq 237 aa
MSEELAKQLSNYKAQLQQVEAALSTDPDNEDLLKLQKDLQEVIELTKDLLTSQPVEGATS
TKSSEAVAPSRSWRVGDHCLATWTQDGQVYEAEIEEIDTENGTAAVTFAGYGNAEVMPLH
VLKPVEEGRSREEDGGKPKSKKELLAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggcaaagcagttgagcaattataaagctcagctgcagcaggtggaa
gcggcgctctcaacagatccagacaatgaagatctgcttaaactgcagaaggacctccag
gaggtgattgagttgacaaaagacctgttgacatcacagccggtggagggtgcaaccagc
accaaaagctcagaggcagtcgctccgtctcgcagctggagggttggagaccattgcttg
gccacctggacccaggatggacaggtatatgaagcagaaattgaagagattgacactgag
aacggcacggcagccgtcaccttcgctggctatggtaatgcagaggtaatgccgcttcat
gtgctcaaaccagtggaggaaggcaggagcagagaagaggatgggggaaaacccaaatcc
aagaaagagctgctggcagagcagagggaatataagaagaaaaaggcccagaaaaaggtg
cagcgcatgaaggagctggagcaggagagagaagatcagaaatccaaatggcagcagttt
aacaataaagcctattccaagaataaaaaaggacaggtgaagaggagtatatttgcatct
ccagagagtgtgaatggaaaagttggcgttggcacgtgtggtatcgcagataaacccatg
acccagtacaatgacacttcaaaatataatgtcaggcacctaatgccccagtga

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