Cyprinus carpio (common carp): 109056324
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Entry
109056324 CDS
T05134
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
KO
K06752
MHC class II antigen
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04514
Cell adhesion molecules
ccar04672
Intestinal immune network for IgA production
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109056324
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109056324
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109056324
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109056324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109056324
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109056324
Exosomal proteins of epithelial cells
109056324
Exosomal proteins of breast milk
109056324
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
C2-set_2
ig
I-set
Podoplanin
Motif
Other DBs
NCBI-GeneID:
109056324
NCBI-ProteinID:
XP_042597660
UniProt:
A0A9Q9X9E6
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All DBs
Position
B16:25888512..25891903
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AA seq
258 aa
AA seq
DB search
MPRSWHSADGLEMCRLIFLFFTFAVFWSFSRAQGVKHLMRQLTYCHIEMMDAGFELEFDG
EELWHVDPNDYTAKQRLPEFAGDWTLDRNLPSLAHLSIGTCFYNIPRCITGEKNPPESIV
PPSTQLYTKSDVKLGVENTLICSVTNFHPPPVNVSWTRNGELVSEQDVSETQYYSNPDFS
FRLFSYLNFRPEQGDIYTCSVRHRGLERDITRFWEVDVPEDSQEVETAVLVIGILVGFLG
FVVGIFIIVMSKMELRAV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttcatggcattcggctgatggccttgaaatgtgccgcttgatctttctgttt
ttcacgtttgccgttttttggagtttttcaagagctcaaggtgtgaagcatttaatgcgt
cagctgacatactgtcatatagagatgatggacgctggttttgagctggagtttgacggt
gaggagctctggcacgttgatcctaatgattacacagcaaaacagcgtttgccagagttt
gcaggcgactggaccctcgaccgcaatctgccttctctagcacacctctccatcggcacc
tgcttctacaatattcctcgctgtatcacaggagaaaaaaatccccctgaatccatcgtt
cctccatccacacagctgtacaccaagagcgacgtgaagcttggtgttgaaaacaccctc
atctgctcagtgaccaacttccacccgccgccggtgaacgtctcatggacgaggaatgga
gagctggtgagtgagcaggacgtcagtgagacgcagtattactccaacccagacttcagc
tttcgcctgttctcctacctgaacttccgtcctgagcagggagacatttacacctgcagc
gtgcgacacagaggactggagcgggacatcaccaggttctgggaggtggatgtgccggaa
gactctcaggaggttgagacggcagtgcttgtgattggaattcttgtgggatttttggga
tttgtggtgggaatctttataatcgtaatgagcaagatggagctgcgggctgtatga
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