Cyprinus carpio (common carp): 109059580
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Entry
109059580 CDS
T05134
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109059580 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109059580 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109059580 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
EGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
109059580
NCBI-ProteinID:
XP_042598141
UniProt:
A0A9Q9XAE1
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All DBs
Position
B17:11423785..11502844
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AA seq
1660 aa
AA seq
DB search
MDMAVLRWDIIVSLTLLIYPASLSADKSGFRKLYVLQPGPSGTDGVHVSSISSLSGASGQ
PHSYNVELKASFGGQVRTRRMGHQSNPNPSIPIRQDAQPGRHTSSYHMKTSGVNVCGGQC
CVGWSKTPGSQRCTKPNCMPPCKNGGMCLRPHICVCKPGSKGKACEQTTLPPSSHPTGPL
NGHTNGGLPNGGHTNGYPNGHNVIPQRPIPQQIFPQGQGQVPLPLPGNNKGHLTLSMKPS
SNGPIPYQPQVQNPMTMHQSKTQKFMVQQKNYHTHTQVHGVGPTLNRAIPLSVGHNPINV
GNHTGRIKVVFTPTICKMTCINGRCQNSCQQGNTTTIISENGHATDTLTAPNFRVVVCHL
PCMNGGKCSARDKCQCPPNFTGKFCQMANPNGHQGQHTVVNGQTHVHSTHTLPLTYGTGH
NQGLVNVHVKHPPEASVQIHQVSPVDSNGQVKNTQSSHTFTYHSSSQSIQHGHTHSGVIY
PNQQTYPQYQPVTSKNQLGRCFQETAGMQCGKALPGLSKQDACCGTVGTSWGFHKCQKCP
KKTSIPLIECPQGYKRMNATRCIDIDECQIQGVCPNGNCINTMGSYRCICNPGFVPDPSL
TACFPETPALREEKGACFRLVSSGKQCLHPVSTQLSKQLCCCSVGKAWGPHCDHCPLPGT
AAFKEICPGGMGYHVTTPYIYKPKPPNGHGQTDGHRWPTIRHQAPVDPPMPFPTLQQPVE
ALSITERQLPVPTVPREELYTHMSVDRSVVQPGQAQLSPGVSTIRMEPALPEVVEKVSPP
APVALPPSIESQDISPTQLAEIDECQVTPDICGAGICYNTLESYKCICDDGYRIDSEGTT
CVDVDECAESPSLCANGHCQNTPGGFLCACEPGFMPNEKGTSCSDIDECQDGRVCPSGLC
YNTLGSFMCSPCPDGFEGRNGQCVDINECLDEKVCAHGQCFNREGYFICTCDEGFSLTPD
GKACIDIDECQDDSVCIQGHCQNTEGSFICNCEPGFILSSTGDQCNDVDECLELSQTCDG
VGQCVNILGSYQCNCPQGYRQVNSTSCQDVDECEDETQLCLPNGECLNTEGSFLCVCDAG
FVSTWDPPGCEDVDECADGSRCVNGTCSNTEGSYLCHCEAGYRLEPTNQTCQDIDECADL
GTSICGVWACQNTLGSYRCEAPCPPGLSRGEHGVCIDVDECSLNENTCGSHGVCHNTIGS
FSCQCDPGFKDSEDGQGCVDVNECELISNVCGEATCENREGTFLCLCPDEMQEFDPMSAK
CFSTTPVTPVERKECYFNLNDENLCDKVLASSMTKEECCCTLGAGWGDNCEVHPCPIPGT
DQFSQMCPASRGYIPSGDPMIPTTSLAESFKDADECKLFENEICKDGFCLNTPGGYECYC
KAGLYYDESKLQCVDTDECADESNCIDGRCINTYGSYQCICTPPLVLTPDSTRCISPDWA
GQRETGVYPGICWETVMERMTCTKPIPDLQTTFTECCCLHGEAWGMDCALCPQKNTKAYA
TMCNIRQVGGPHRPYGQDALVAGPVIEYGPEYDSRPPNPDGTLPLYEDYEEPRNPYDAFE
GLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLNMSRMACVDINECSELNTKMSLCKN
GKCINTQGSYKCVCLPGFVHSTQHSYCVPQRQNATSTSTE
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggatatggctgtgctcaggtgggacatcattgtttcactaacgttattgatttatccg
gcttcactctcggcggataagagcggcttcaggaaactttacgtacttcagccgggaccg
agcggcacggacggggttcacgtgagctctatttcatcgctctcgggagcgtcgggacag
ccgcactcctataatgtggagctcaaagccagcttcggcggccaggtccggacccgcaga
atgggtcaccagtcgaacccgaacccgagcattccgatccgccaggacgcgcagcctggc
cgacacacatccagctatcatatgaaaacgtcaggagtgaacgtctgtggggggcagtgc
tgtgttggttggagcaagaccccgggatctcagcgctgcactaaacctaactgtatgcct
ccatgcaaaaatggagggatgtgtttgcggccccacatttgtgtttgtaaaccaggctct
aaaggcaaggcctgtgaacagaccactctgcccccgtcctctcatccaactggaccatta
aacggacacaccaatggtggacttccaaatggaggtcatacgaatggatatcccaacggt
cataatgtaattccccagcgtcccattcctcagcagatcttcccacaaggccaaggtcaa
gtgcctttaccgttgcccggcaacaacaagggacatctgactctgtccatgaagccgtca
tctaacggacccattccctatcaaccacaagtacaaaacccaatgacaatgcaccaaagc
aaaacccagaaattcatggttcaacagaaaaactaccacactcacacacaggtgcacgga
gtcggacccaccctgaaccgggccatccctctttcagtgggacacaatccaataaatgta
gggaaccacacaggccggatcaaggtggtcttcaccccgactatctgcaagatgacctgc
attaatggccgctgtcagaacagctgtcagcagggcaacaccaccactatcatcagtgag
aatgggcacgctacggacacgctcaccgcccccaacttcagagtcgttgtttgccatttg
ccctgcatgaatggaggaaaatgcagcgctcgggacaagtgccagtgcccaccaaacttt
actggaaaattctgccaaatggccaatcccaacggtcaccagggtcaacatactgtcgta
aacggacagacacacgtccactcaacgcacacgttacccctcacctacggcactggacac
aaccagggtttggtgaatgtccatgtgaaacatcctccagaagcctctgtccagatccat
caagtgtctccggtggacagtaacgggcaggtcaaaaacacacagtccagccacaccttc
acctaccacagcagcagccagagcatccaacatggacatactcacagcggcgtcatttac
cccaaccagcaaacatacccccaataccagccggtgacttccaagaaccagctgggacgc
tgcttccaggagactgctggaatgcagtgtgggaaagctctgcccggcctgtctaaacaa
gatgcctgttgtgggacggtgggcacatcatggggattccacaaatgccaaaaatgcccc
aagaaaacatcgattcctttgattgaatgtcctcaaggctataagaggatgaatgccact
cgctgtatcgatattgatgagtgccagattcaaggagtttgtcccaatggaaactgcata
aacaccatgggaagttacagatgtatctgcaacccaggctttgtgcctgatcccagtctg
accgcctgcttccctgaaacacctgctcttcgcgaggagaaaggtgcttgcttccgattg
gtcagttcggggaagcagtgcttgcaccctgtgtccactcagctgagtaaacagttatgc
tgttgtagtgtgggcaaggcctggggtcctcattgtgaccactgccccctacctgggaca
gctgcgtttaaagaaatctgtcctggaggaatgggttatcatgtcaccacaccgtacatt
tacaagcccaaacctcctaatggacacggccagacagacggtcacagatggcccaccatc
agacaccaagcacctgtggatcctcccatgcccttccccaccctacagcagcccgtggaa
gctctcagcatcacagagaggcagctacctgtgcccacagttccccgggaggagctttat
acccacatgagtgttgataggtcagtagtacagcccggacaggcccagctgtcacccggg
gtgtctacaatcaggatggagcctgccctcccagaggtggtggagaaggtgtcaccaccc
gctcctgtggcacttccgccctccatagaaagtcaggacatctccccaacacagctggca
gagattgacgagtgtcaagtgacacctgatatctgtggtgcaggaatctgttataacact
cttgaaagctacaagtgcatctgtgatgacggctatagaatagacagtgagggcaccaca
tgtgtagatgtggacgagtgtgcagagagcccaagtttgtgtgctaatggtcactgtcag
aacactccaggcggattcctgtgtgcgtgtgagcctggcttcatgcctaacgagaagggc
accagctgctccgatatcgatgaatgtcaggatgggagagtgtgtccgtccggtctctgc
tataacactctgggctctttcatgtgttctccttgtccggatgggtttgaagggagaaat
ggccaatgtgttgatataaatgagtgtctggatgaaaaagtatgcgctcatggtcagtgc
ttcaatcgggagggctatttcatttgcacatgtgatgaaggattctcgctcactcctgat
ggcaaggcctgcatagacattgacgaatgccaggatgacagcgtgtgcatccaaggtcac
tgtcagaacacagaggggtcgtttatctgcaactgtgagcctggctttatattgtcgtcc
acaggagaccaatgtaacgatgtggatgagtgtttggagttatctcagacctgtgatggt
gtggggcagtgcgtcaatatcttgggatcttaccagtgcaactgcccacagggatataga
caagttaacagcaccagctgccaagatgttgatgagtgtgaggatgagacacagctgtgc
ctccccaacggagagtgtttgaacacagagggttcgttcctgtgtgtgtgtgatgccggc
tttgtgtccacctgggatccaccaggctgtgaggatgtagatgaatgtgcggatggcagc
agatgtgtaaatggtacctgttcaaacacagagggctcgtatctctgccattgtgaagca
ggctaccgcctggagccaaccaatcagacgtgccaggatattgatgagtgtgctgacttg
gggacgtctatctgtggggtttgggcctgtcagaacacactgggctcttaccgatgtgag
gcgccctgcccacctggcctttctcgaggcgaacatggcgtctgcattgacgtggatgag
tgttctctgaatgagaatacctgtggaagtcatggtgtttgtcacaatacaataggctcc
ttcagctgccagtgcgacccaggattcaaggactctgaggatgggcaggggtgtgtggat
gtgaacgagtgtgagctgatcagtaatgtgtgtggtgaggccacctgtgagaatcgtgaa
ggcaccttcctgtgtttgtgtcctgatgagatgcaagaatttgatccgatgtcggccaaa
tgcttctctacaacaccagtcacaccagtggagaggaaagagtgttatttcaacttgaat
gatgaaaacctgtgtgataaggtgctggccagcagcatgactaaagaggagtgctgctgt
acactaggagccggctggggggacaactgtgaggtccatccctgccccataccaggaaca
gatcagttctcccagatgtgtccggcaagccggggttacataccttctggagatcctatg
attcctacaaccagcttagcagaaagcttcaaagacgcagacgaatgcaagctttttgaa
aatgagatctgcaaagacggcttttgtctcaatacccccggtgggtatgagtgttactgc
aaggccggactctactatgatgagagcaaactgcagtgtgttgacactgatgaatgtgca
gatgaatcaaactgtatagatggtagatgtataaacacatatggctcatatcagtgtatc
tgcactccgcccctggttttgacaccggacagcactcgctgtatttcacccgactgggca
gggcaaagagaaactggtgtgtacccaggtatttgctgggagactgtaatggaaaggatg
acctgcacaaagcccattcccgatctacagaccacgttcacagagtgctgctgtttacac
ggagaggcctggggcatggattgtgctctctgcccacagaaaaatacaaaggcctatgcc
actatgtgtaatatccgtcaggttggtggtccccatcggccgtatggtcaggatgctttg
gtcgctggcccagtcattgaatacggccctgaatatgactctcgacctccgaacccagac
ggcacactgcccctctatgaagattatgaagaaccaagaaatccatatgatgcgtttgaa
ggactgcgagcagaggaatgcggcgtgctgaacggatgtgagaatggacggtgcgtgcgg
gtgcaggagggatacacctgtgactgcttcgatggatacacactcaacatgtcccgcatg
gcctgcgtggatatcaatgaatgctcagagctgaatacaaagatgtctctttgcaagaac
ggcaagtgcatcaacacgcaaggctcatataagtgtgtgtgtctgccaggatttgtccac
tccacccagcacagctactgtgtgccccaaagacagaatgcaaccagcacgagcacggag
tga
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