Cyprinus carpio (common carp): 109059958
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Entry
109059958 CDS
T05134
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03272
Virion - Hepatitis viruses
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109059958
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109059958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109059958
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109059958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM252
Psg1
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
109059958
NCBI-ProteinID:
XP_042585634
UniProt:
A0A8C1P2C9
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Position
A3:complement(30771998..30781898)
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AA seq
870 aa
AA seq
DB search
MESSLTLLLAVTFFCPAQTGVFTCEPRQYQCGNGKCITSRWVCDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENGADEEGCAPRQCRDGEFSCGNSQCVS
AAFVCDDERDCDDGSDEVSCPPTTCGSSSFRCNNAQCVPRLWVCDGDADCADGSDESPQK
CSPGTPKPSKNPCSSMEFHCGSGECIHSSWKCDGGEDCLDHSDEKNCSLPTCRPDEFQCG
DGSCIHGSRQCNHVYDCRDLSDELGCVNATHCEPPHRFKCRSGECISMEKVCNKQRDCRD
WSDEPLRECDSNECVYNNGGCSHICNDLKIGYECLCPTGFRLVDKRRCEDIDECADPDTC
SQICVNQMGSYKCECEDGYQMDPASKACKAIGTIPYLFFTNRHEVRKMTLDRSEYTRVIP
NLKNAVALDMNVASREIYWSDLSLKKIYRAPMDTADNSSQHSVVIGSDLYAPEGIAVDWI
HGNIYWTDSIKKTISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTSAKIER
SGLNGGDRHALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISMQGDGRHTLIIDQGK
LAHPLGLTVFEEKVFWTDVSSNAILSANRITGKDITKVAEHLSSPEDIVLYHNLKQPSGI
NWCRVNNGGCDFLCLAAPQINRFSPKYTCACPDNMVLARDMRKCVQAVVTTAPPARPKIV
TTSRPQVPSKTTPKPAGPSTTNVQPSSTPAPVIPNRPTQAVPINPSQTTIKLPLSTQTDD
HYGIDKAVSESSSSTPLALYILLPLAILCLVVGGAVLFWRKWRQKNTNSIHFDNPVYQKT
TEDQVHLCRNGSSDGYFYPPRQIVSINDEI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcattaacacttttactggcagttactttcttctgtcctgctcaaacaggt
gttttcacttgtgaaccacggcaatatcagtgcggcaatggaaagtgtatcacatcaaga
tgggtatgtgatgaaactgatgactgtggtgacggcactgatgaacttcctgctgcctgc
ttggccaagacctgcagacccagtgaattcagctgtggtgggcgactcaaccagtgtgtg
ccaaagagctggaagtgtgatggcaaagcagactgtgagaacggtgcagatgaggaaggc
tgtgctcctcgacagtgtcgggatggcgagttcagctgcggcaacagccagtgtgtgagt
gccgcgtttgtgtgtgatgatgagagagactgcgatgatggcagtgatgaagtctcctgt
ccacccaccacgtgtggctccagctccttcaggtgcaacaatgcacagtgtgtgcctcga
ctgtgggtatgtgatggagatgccgactgtgccgatggctcagacgaatcgcctcagaaa
tgcagtccagggacgcctaaaccttccaaaaatccctgctcctctatggaattccattgc
ggcagtggagaatgcatacacagtagctggaaatgcgacgggggagaagattgcttggat
cactcagatgagaaaaactgctccttgcccacatgccgaccggatgagttccaatgtggt
gacggatcttgcatccatggcagccggcagtgcaaccacgtatatgactgcagagattta
agtgatgagctgggttgtgttaatgcaacccattgtgagccaccacacaggtttaagtgc
cgcagtggtgaatgcatcagcatggaaaaagtttgcaacaagcaacgggactgtagggat
tggtccgacgagccattacgagaatgtgattctaacgagtgtgtttacaacaatgggggc
tgctctcatatctgtaatgacctgaagattggttacgagtgcctgtgtcctactggtttc
cgattggtggataagagacgatgtgaagacattgatgagtgcgccgacccagacacctgc
agccaaatatgtgtcaaccagatgggaagttacaagtgtgagtgtgaggatggctaccag
atggacccagccagcaaggcttgcaaagctattggaaccatcccctatctatttttcacc
aatcgccatgaggtaaggaagatgactctggatcgcagcgagtatacacgtgtcattccc
aacctgaagaacgctgtggcactggatatgaatgttgcttccagggagatctactggtca
gatttatccctcaaaaagatatacagagcaccaatggatacagcagataactcctcccaa
cacagtgttgtgattggcagtgatttatatgcaccggaaggtatcgctgtcgactggatc
cacggaaacatctactggacagacagtatcaaaaagaccatctctgtagcaacagcggac
ggaagcaggcgcaagactctcttcaaagaaaacctggccaagccgcgtgctattgttgtc
gatcctattaagaacttcatgttctggactgattggggcacatcagctaagatcgagaga
agtggtcttaatggaggggaccgtcatgccctagttacagataacattgtctggcccaac
ggaataacccttgaccttttgaaccagcgtctgtactgggtcgactccaaactacacact
ctctccagcatcagcatgcagggagatggtcggcatactctgatcatcgaccagggcaag
cttgcccaccctctgggtctcactgtttttgaggagaaagtgttttggacagatgtgagc
agtaatgcaattctaagtgcaaatcgtattactggaaaagatattacaaaagttgccgaa
cacctctcatccccagaggacattgtcttgtaccacaacctcaagcaaccgagtggaatc
aactggtgcagggtcaacaacggtggctgtgatttcctgtgcctggctgcccctcaaatc
aatagattctcacccaagtacacttgtgcctgtccagacaacatggtgttggccagagac
atgcgaaaatgtgttcaagctgtagtcacaacagcacctcctgcaaggcccaaaatagtt
acaactagtcgtcctcaagtaccttcaaagacaacaccaaaacctgctggcccttccact
accaatgtgcaaccttcatctactcctgctcctgtgatccctaaccgacccactcaagct
gtccctatcaacccttcccaaaccacaattaaacttcctttatccacccagacagatgac
cactacggtattgataaagctgtgtctgaatcatcatcttccacaccgttggccttgtac
attttgcttcctcttgcaatcctatgtttggttgtgggtggtgctgtgctgttctggaga
aaatggcgtcagaaaaatactaacagcatccactttgacaacccagtttatcaaaagact
acagaggaccaggtgcatctatgcagaaatggcagttctgatggctatttttacccaccg
agacagattgtgagtataaatgatgaaatatga
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