Cyprinus carpio (common carp): 109063142
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Entry
109063142 CDS
T05134
Name
(RefSeq) oxysterols receptor LXR-alpha-like
KO
K08536
liver X receptor alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03320
PPAR signaling pathway
ccar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109063142
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109063142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109063142
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccar03310
]
109063142
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109063142
Nuclear receptors [BR:
ccar03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
109063142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
109063142
NCBI-ProteinID:
XP_042616215
Ensembl:
ENSCCRG00000038214
UniProt:
A0A8C1U622
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Position
A7:complement(20066034..20081811)
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AA seq
441 aa
AA seq
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MSTLSTTDITDVGHGDSLCCAGEEGPSAAIAKVKQETLSQTVSYGTSHNDLNDTLLMEPS
DIKMYPTEDTPLPEGRPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGARYTCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQEE
ETARTSAVATPGPAPEMPSLAPEQQEMIEKLVALQKQCNKRSFLDRPKVTPWPQSQDPLN
REVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRY
NPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAINIFS
ADRPNVQDHELVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctacgactgatatcactgatgttggtcatggggactccctgtgctgt
gccggtgaagaaggcccttcagcagcgatagcaaaagtgaaacaggagactctcagtcag
acggtgtcatacggcacctcacacaatgacctgaacgacacgctgctcatggagcccagc
gacatcaagatgtaccccacagaggacacacctctaccagagggtcggccagtcaagaga
aagaaaggccctgctcccaagatgttggggaatgaggtgtgtagtgtatgtggagacaaa
gcatctggctttcattacaacgtgctcagctgcgagggctgtaaaggtttcttcaggcgc
agcgtcatcaaaggagctcgatacacctgtaagaattcgggccgctgtgagatggacatg
tacatgcgccgcaagtgtcagcagtgccgtctgcgcaagtgcagggaggcaggaatgctg
gagcaatgtgtgctgtcagaagagcagatccgactgaaaaagatgaaaaaacaggaagag
gagacagcacgtacctctgcagtggcaacacccggtcctgcccccgagatgccctctctg
gctcctgaacagcaggagatgatcgaaaaactggtggccttgcagaaacagtgcaacaaa
cgctcttttcttgaccggcccaaagtcactccatggccacagagtcaggacccacttaac
cgagaggttcgacagcagcggtttgctcatttcactgagctggccatcatgtctgtgcag
gagattgtagactttgctaaacagctgcctggcttcctggagctcacccgagaggaccag
atcgccctgctgaagacctcaactatagagatcatgctgctagagacttccagacgttat
aacccagcgatagatagcatcaccttcctcaaagacttcagttacaataaggaagatttt
gccaaagcgggactgcagtttgagttcatcaaccccatctttgagttttcaaaaggcatg
aatgacctccacctggatgaggcggagtacgctttgctcatcgctatcaacattttctca
gcagaccgaccgaacgtgcaggatcacgagttagtggaaagactacagcagccatatgtg
gacgctctccactcttacatcagaataaaacgacccaacgatcatctgatgtttccccgg
atgctgatgaagctggtcagtctacgcacactgagcagcgtccactcagagcaagtcttt
gctctgcgcctccaagacaagaaactcccacctctgctttctgaaatttgggatgtccac
gagtga
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