Cyprinus carpio (common carp): 109063366
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Entry
109063366 CDS
T05134
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109063366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109063366
03032 DNA replication proteins [BR:
ccar03032
]
109063366
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109063366
mRNA cycle factors
Common to processing body (P body) and stress granule
109063366
DNA replication proteins [BR:
ccar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
109063366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
MCD_N
Motif
Other DBs
NCBI-GeneID:
109063366
NCBI-ProteinID:
XP_042611229
Ensembl:
ENSCCRG00000019544
UniProt:
A0A9R0ATZ2
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MNFWPYQAAVCLCLVSTKMADELERVRISAAEIRAEASSFTTQSDGVKELREEGKKQRQR
DGKCPDLQWYKPGAVHPCRHKDSAEGASSDPVHLSDDCVFGNDTKMPDCSPASPGCSHVS
TGDFPNDHSQSEGSFNIKGHVGVVNHQLMDGNAVKSIEGAGMPRSPKQSRKMRKPDREIY
QPGGRRSQAHKETRASKELDGDRKREEEVSVKSAETITKCEKEEKRRNRRGKDGKKKQES
KGTVDSPAANKNENNVESVTIKVSNLHLDSEESKDGAGQDGTNRRKPSGEWRRSQAGGGN
EVTGEDKKMERGNGKYRAGRDKGNNQVFTKKEEGEGVGKGSEADQPEGKKQRSVGGKEVS
RDQNMNHEKQQGNRPKEKGKLSDRTDSNRVSSASKRYSQSDIRRPRYRTYSTSSASSGTS
MDGLAEAERLRGEGHQLAARTAERTTGQKEFIRGSQGRPRRRTARTLSSTDSLEENEVWE
REDRRGRVADEAKRTHKGPEGGGRGQRAPASSSRGGILRVSLDKHSSEEQASRKNPRGHG
RGILVLPAHTDLTLTSDPGPQLGGMRGGMGLSRGRGGRGGGTRRLWDPNNPEKKPALVSS
QQSQHASLQQALYLQQGGCGPLHFLDTDDETTGSPPVRQGEFFQNQQAAAMAYYKFQNSD
NPYCYPLSAKSPNTPPRYPYPYHIPYQIPGSNGMYPASVPPFYGPYGQGGPGYPSPAGSG
LTPEEAEVQTRGELGKLLRLADSHELQLSNLLSRERLSPEGLERMAQLRAELLTLYERVI
LTDIEFSDSQNLDQALWKNVFYQVIESFRQLLKDQMSDTAPQIKTMLMNILEEGAVFFDS
LLQKLQTVFQFKLEDYMDCMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSAN
YGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLM
SLFEEAKRKADQIECRRKQEVDGGTRGPRGHVGGRRGEDGTRVEIWIRPTGHPGTSRPTG
SESGKDSEQDGELGTLSPSDLNKRFILSFLHTHGKLFTKVGMESFPAVASRVLQEFWALL
QHSPSPLGSTRMLQIITINMFTIHNAQIRAEGQGETRSVLEEQTISLGLAMFGLLVQRCT
ELLQETPAEPIPAEELGEFDEMDEEEGMVRVSVFPPDLRELLPSMKVWSDWMLGHPEKWN
PPPCSIQGGPDVWQCLADLCNSLARVYHGEVLLYKADVDGGGDEELRVLQLEEDKMLSGF
VPLLAAPQEACYIDQETDAAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISMATPP
TPSINTENKAQMQEQEDDVIVEESSLSASEGEIDGKMEGDGSEDDIRELKARRHALTHKL
AQQQKRLDKIQAVLQTGGQLEIQIRPFYLVPDTNGFIDHLEGLRKLLACGTYILVVPLIV
ITELDGLAKGQDSREGISNGAHARQVQERARAAVMFLEKAFEARDPCIRALTSRGNALES
IAFRSEDTSGQKGNNDDVILSCCLHYCQDKAKDFMSAERNGPVRLRREVVLLTDDRNLRV
KALTRNVPVRDIPAFLIWAKVG
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttggccctaccaagccgccgtgtgtttgtgtttggtttcgacgaaaatggcg
gacgagctcgaaagagtacgaatttcagccgcggagatacgagcagaagcgtcgagtttc
accacacaaagcgacggtgtaaaagaattgcgagaggagggtaaaaagcaacggcagcga
gatggtaaatgtccagacttgcagtggtacaaacctggtgctgtccatccatgcagacat
aaagacagcgcggaaggagccagctcagaccctgtgcatctatcagatgattgtgttttt
ggtaatgacaccaaaatgcctgactgctcacctgccagtcctggatgctctcacgtaagc
actggagactttccaaatgatcacagtcaatctgaaggaagttttaacattaaaggacat
gtaggtgttgttaaccaccaacttatggatggaaatgctgttaaaagcattgaaggagct
ggtatgcccaggtcaccgaagcagtcacgaaagatgcggaaacctgaccgtgagatatat
cagccaggggggcgaaggtctcaagcacacaaagagaccagggcgagcaaagaattagat
ggggatcgaaagagagaggaagaagtgagtgtaaaatctgctgaaacaattactaagtgt
gagaaagaggaaaagcgtagaaacaggcgagggaaagatggcaagaaaaaacaagagtcc
aagggaactgtagactcccctgctgcaaacaaaaatgagaataatgtagagagtgtcacc
attaaagtcagcaatctccatttagattctgaggaaagcaaagatggagctgggcaggat
ggtacaaaccggagaaaacctagtggggaatggcgaagaagccaagcaggtggagggaat
gaagtgactggagaagacaaaaaaatggagaggggtaacgggaaatacagagcaggaagg
gataaaggtaacaaccaggtctttaccaagaaagaggaaggggagggggtaggaaaaggc
tcagaagcagatcaacctgaaggaaaaaagcaaagaagtgttggtggaaaggaggtgagt
cgtgaccagaacatgaaccatgaaaaacaacaagggaacaggccaaaagagaaaggaaaa
ctatctgatagaaccgattcaaacagagtcagctctgcctcgaagcgatactctcagtca
gacatccggcgtcctcgataccgcacctacagcacgagttcggccagtagcgggaccagt
atggatggtctggctgaagctgagagacttagaggggagggtcatcagttggctgcacgc
actgcggagaggaccactggacagaaggagttcatccgagggagccagggccgcccgagg
agacggacggcacggacattgtcctccacagattcgctggaggaaaatgaggtgtgggag
agagaagatagaagaggcagagttgctgatgaagccaagagaacccacaaaggtcctgaa
gggggcggaagagggcaaagagcacctgcatctagcagtcgaggaggaattttaagagtt
tctttggacaagcattcaagcgaggagcaagcgagtcgaaaaaaccctagaggtcatggg
aggggcatcctagtgcttcctgcccacactgatctaactttgacctctgaccctggtcct
cagcttggaggaatgagaggagggatgggtctgagccgaggaagagggggccgtggagga
gggacaagacgcctttgggacccaaataatccggaaaagaaaccagcactggtatcaagc
caacaatcccagcatgcatctctccagcaggctttgtacttgcagcagggtggatgtggt
ccgctgcactttctggacactgatgacgagaccaccggaagtcctccggtccgccagggc
gagttttttcaaaaccagcaagccgctgccatggcttactataaattccagaattctgac
aatccctactgttatccactatcggccaaatccccaaacaccccgccacgctatccttac
ccatatcacattccctaccaaattcctggctctaatgggatgtatcctgcctctgtgcca
cctttttatggaccctatgggcaaggtgggccaggttatccctctccagcgggatctggt
ctcactccagaagaggcagaggtgcagacgagaggagagctgggaaagttgcttcggctg
gctgacagtcatgaactccaactcagtaacctgttgtcccgggaacgactgagcccggag
ggtttggagaggatggcccagctcagggctgaactcctgaccttgtatgagcgggtgatt
ttgacagacatagagttctccgactctcaaaacctggatcaggctctgtggaagaatgta
ttttaccaagtgatagagagttttaggcagctactgaaggaccagatgtcagacacggcc
ccacagatcaaaaccatgctgatgaacattctagaagagggggcagttttctttgattcg
ctgctacagaagttgcagactgtatttcagtttaagctggaggactatatggactgcatg
gctatacgagcaagacctctacgcaagacggtgaagtatgctctgatcagtgcccagcgc
tgcatgatctgtcagggggatatcgcgcgatatcgtgaacaggctagtgactctgccaac
tatgggaaggcacgcagttggtatctaaaagctcagcagattgctccgaaaaatgggcga
ccctacaaccagctggccctactagcagtgtatacgaagcgaaagctggatgctgtatac
tattacatgcgtagtctagccgccagtaacccaatcctcacagccaaggaaagcctgatg
agtctgttcgaggaagccaagcgcaaggctgaccagattgaatgcagacggaagcaggaa
gtagatggaggaacccgtggaccccgaggtcatgtgggtgggcgtcggggtgaggacggc
actcgtgtggagatctggatacgtcccaccgggcatccgggcacttctcgtccgacaggc
agtgaatcgggcaaagactctgagcaggacggagagctgggaactctgagtcccagtgat
ctcaacaagaggtttattttgagtttcctgcatactcatggaaagctcttcactaaagta
gggatggagagttttccagctgtagcgagtcgagtgttgcaggagttttgggccctcctc
cagcacagcccctcccccctcggcagcacacgcatgctgcagatcatcactattaacatg
ttcaccatccataacgcacagatcagagctgaagggcagggtgaaactcggtccgtattg
gaggagcagaccatatctcttggtttagctatgtttggtctccttgtgcaacgttgcact
gaacttctgcaagaaacacctgctgagcccatcccagcagaagagctgggggagtttgac
gaaatggacgaggaggaggggatggtacgggtgtctgtcttccctcccgacctcagagag
ttgctacccagcatgaaggtctggtctgactggatgctcggccacccagagaagtggaac
cctcctccctgcagtattcaggggggtccagacgtgtggcagtgtcttgcagatctgtgc
aactctttggcacgcgtgtatcatggtgaggttttgctgtataaagctgatgtagatgga
ggaggagacgaggaactcagagtcctacagctggaggaagacaaaatgctctctggcttt
gtcccactgctagctgccccacaggaagcctgctatatagaccaagaaacagatgcggct
atagcagctgactgtaagagagtgaccgttctgaagtacttcctggaagctctgtgcggg
caggaagagccactgctggcttttaaaggaggaaagtacatttccatggcaacacctcct
acacccagcataaacacagagaacaaggcgcaaatgcaagaacaggaggatgatgtcata
gttgaggagtcgtctctctctgcatcagaaggtgagatcgatggaaagatggaaggagac
ggaagtgaggatgatatcagagagctgaaggcacgacgtcacgctctcacacacaagctg
gcacagcagcagaaacggctggacaagatacaggctgttctgcagacaggtgggcagcta
gagattcagatcaggcctttctatctggtcccggacacaaacggcttcattgatcatctg
gaggggctgaggaagcttctggcctgtgggacgtacatcctggttgtgcctcttattgtg
atcacagagttggacggtcttgctaaagggcaggacagtcgtgaggggatcagtaatggt
gcccatgcccgacaggtgcaggaaagagccagagcagcagtcatgtttctggagaaagca
tttgaggctagagatccctgcatcagagcgctcaccagcagaggaaacgcactggagtcc
attgccttccgcagtgaggacacttctggacaaaagggcaacaacgatgatgtcatcctg
tcctgctgtctgcactactgtcaggacaaagccaaggacttcatgtctgctgagagaaat
gggccagtgaggttgcgcagggaggtggtcttgctcacagatgaccgcaacctgcgagtc
aaagctctcacacgtaacgtgcctgtccgggacatcccagcattcctgatctgggctaaa
gtaggctga
DBGET
integrated database retrieval system
