Cyprinus carpio (common carp): 109063875
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Entry
109063875 CDS
T05134
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03272
Virion - Hepatitis viruses
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109063875
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109063875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109063875
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109063875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF_3
TMEM252
Motif
Other DBs
NCBI-GeneID:
109063875
NCBI-ProteinID:
XP_042576735
Ensembl:
ENSCCRG00000040492
UniProt:
A0A8C1IVG4
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All DBs
Position
B3:complement(31819543..31832732)
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AA seq
856 aa
AA seq
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MESSLIFLLAVTFFSPGQTGVLTCEPRQYQCGNGKCITSRWVCDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENSADEEGCDPRRCLDGEFRCGSGQCVS
TAFVCDEESDCDDGSDEVSCPPTTCSSNSFRCNNAQCVPRLWVCDGDADCADGSDELPQK
CSTGTPKPTKNPCSSMEFHCSSGECIHSSWKCDGGEDCLDHSDEKNCSLPTCRPDEFQCG
DRSCIHGSRQCNHVYDCKDLSDELGCVNATHCEPPHRFKCRSGECISMENVCNKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFWLVDKRRCEDIDECANPDTC
SQICVNLMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRVIP
RLKNVVALDMNVASREIYWSDLSLKKIYRAPMDTADNSSQHSVVIGSDLDAPEGIAVDWI
HGNIYWTDSIKGAISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIER
GGLNGGDRYALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISMQGDGRRTLIFDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGRDITNVAEHLSSPEDIVLYHNLKQPTGI
NWCRVNNGGCEFLCLAAPQINRLSPKYTCACPDNMMLARDMRKCVQAVVTPEPSVKPEIV
TTSHPKVPSKTTPNPTPAISKRPTQPAPIKPSQTTTKLPLSTQTDDHYSNVKAVSQSLSS
TLLALYILLPFAILCLVVGGAVLFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRNSSSD
GYFYPQRQVVSIDDEI
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcattaatatttttactggcagttactttcttcagtcctggtcaaacaggt
gttttgacttgtgaaccacggcagtatcagtgtggcaatggaaagtgtatcacatcgaga
tgggtgtgtgatgaaactgatgactgtggtgacggcactgatgaacttcctgctgcctgc
ttggccaagacctgcagacccagtgaattcagctgtggtgggcgactaaaccagtgtgtg
ccaaagagctggaagtgtgatggcaaagcggactgtgaaaacagcgcggatgaagaaggc
tgtgatcctcgccggtgtctggatggcgagttccgctgtggcagcggccagtgtgtgagt
accgcatttgtgtgtgatgaagagagcgactgtgatgacggcagtgatgaagtctcctgt
ccacccaccacgtgtagctccaactccttcaggtgcaacaatgcacagtgtgtgcctcga
ctgtgggtctgtgatggagatgcagactgcgctgatggctcagacgaattgcctcagaaa
tgcagtacagggacgcctaaacctaccaaaaacccctgctcctctatggaattccattgc
agcagtggggaatgcatacacagtagctggaaatgcgatgggggagaagattgtttggat
cactccgatgagaaaaactgctccttgcccacatgccgaccggatgagttccaatgtggt
gacagatcttgcatccatggcagccggcaatgcaaccacgtatatgactgcaaagatttg
agtgatgagctgggctgtgttaatgcaacccattgtgagccaccacacaggtttaagtgc
cgcagtggtgaatgcatcagcatggaaaacgtttgcaacaagcaacgggactgtagagat
tggtccgatgagccattacgagaatgtgattctaacgagtgtctttacaacaacgggggt
tgctctcatatctgtaatgacctaaagattggttacgagtgcctctgtcccactggcttc
tggttggtggacaagcgacgttgtgaagacattgatgagtgcgccaacccagacacctgc
agccaaatctgcgtcaacctgatgggtagttacaagtgtgagtgcgaggatggctaccag
atggacccagccagcaaggcttgcaaagctatcggaaccatcgcctacctatttttcacc
aatcgccatgaggtcaggaagatgactctggatcgcagcgagtatacacgtgttattccc
cgcctgaagaatgttgtggcactggatatgaatgttgcttccagggagatctactggtcg
gatttatccctcaaaaagatatacagagcaccaatggatacagcagataattcctcccaa
cacagtgttgtgattggcagtgacttagatgcacctgaaggtatcgctgtcgactggatc
catgggaacatctactggacagacagcattaaaggtgccatctctgtggcaacagcggac
ggaagcagacgcaagactcttttcaaagaaaacctggccaagccacgtgctattgttgtc
gaccctattaagaacttcatgttctggactgattggggcacaccagctaagatcgagaga
ggtggtcttaatggaggggaccgctatgctctagttacagataacattgtctggcccaat
ggaataacccttgaccttttgaaccagcgtctgtactgggtcgactccaaactacacact
ctctccagcatcagcatgcagggagatggtcggcgtactctgatctttgaccagggcaaa
cttgcccatcctctgggtctcactgtttttgaggagaaagtgttttggacagatgtgagc
aataacgcaattctaagtgcaaatcgtgtgactggaagagacatcacgaatgtggccgaa
catctttcgtccccagaggacattgtcttgtaccacaacctcaagcaaccgactggaatc
aactggtgcagggtcaacaacgggggctgtgaattcttgtgcctggctgcccctcaaatc
aatagactctcacccaaatacacttgtgcctgcccagacaacatgatgttggccagagac
atgcgaaaatgtgttcaagctgtagtcacaccagaaccttctgtcaagcccgaaatagtt
acaactagtcatcctaaagtaccttcaaagacaacaccaaatcccactcctgcgatctct
aaacgacccactcagcctgctccaatcaagccatcccaaaccacaactaaacttccttta
tccacccagaccgatgaccactacagtaatgtcaaagctgtgtctcaatcattgtcttcc
acactgttggccttgtacattttgcttccttttgcaatcctgtgtttggttgtgggtggt
gctgtgctgttctggagaaagtggcgtcagaaaaataccaacagcatacactttgacaac
ccagtttatcaaaagaccacagaggaccaggtgcatctatgcagaaacagtagttctgat
ggctatttttacccgcagagacaggttgtgagtattgatgatgaaatatga
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