Cyprinus carpio (common carp): 109064413
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Entry
109064413 CDS
T05134
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109064413
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109064413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
ATP-synt_B
Lustrin_cystein
GPHH
Motif
Other DBs
NCBI-GeneID:
109064413
NCBI-ProteinID:
XP_042623110
Ensembl:
ENSCCRG00000052355
LinkDB
All DBs
Position
A12:3622273..3667806
Genome browser
AA seq
1830 aa
AA seq
DB search
MASLLPPTGTDVFRRFTPESLVEIDRLIHERSTREDVEGVEKEPQAPSSDLEAGKCLPMI
YGDPPKDLLNTPLEDIDPFYKTQKTFIVISKGNTIYRFTAEPAMFCISPFSLVRRGAIKI
LIHSLFSMIIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATIKVLSRGFFIGPFT
FLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMVNVMILTLFALAVFALIGLQLFMGNLRHKCIRWPIANSTIFDDYNSTMVNDTTLNIT
DTFDFKAYIDNEENQYFLEGSLDALICGNSSDAGCPEGYTCMKAGRNPNYGYTSYDNFGW
AFLTLFRVMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYDEQN
EATLAEAHQKEEEFQRLLEQLRNQEQEAGSKASLASQTAQSQGSNRTGSLQSLGGDDVIK
DCNGRIVPRLVVNRASINKELSAEEDHKSMSSKHSMQYLDEPKLSKRTASAISVLTATME
ELEDAQRPCPPGWYKFADIFFKWDCCTPWIIFKKWVHFVVMDPFADLGITICIVLNTLFM
AMEHYPMSPDFEHVLSVGNLVIFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTLSL
VELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKDCVCKISQDCKLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAG
ATMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRINRGVD
WFKAFIASMLRKILGKKPPENNEGGGEGDIELHAINHLDEGKIEEGLTNCLPPALTVPIA
CCESDVDEEEDSDESTDEEDGKATLNDDDSSVCSTVDYRPPEPEPEPEEEEEPEPEEPES
CFTEGCVKRFTCLNVDITAGWGKKWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFED
INIERRRVIKTILEYADKVFTYIFIVEMLLKWVAYGFKTYFTDAWCWLDFLIVDVSLVSL
TANLLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWL
IFSIMGVNLFAGKFYHCINTTTEERIPMDVVNNMSDCMALMHTNEARWVNVKVNYDNVGT
GYLSLLQIATFKGWMDIMYAAVDSREVEDQPSYEINLYMYLYFVIFIIFGSFFTLNLFIG
VIIDNFNQQKSKFGGKDLFMTEEQKKYYNAMKKLGSKKPAKPIPRPSNEIQGVVFDFITQ
QFFDIFIMVLICLNMVTMMIETDDQSAEKEEILYQINLIFIVIFTGECVLKMFALRHYFF
TIGWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLL
FALMMSLPALFNIGLLLFLIMFIFSIFAMANFAYVKKQAGIDDIFNFETFGGSIICLFEI
TTSAGWDGLLLPILNSGPPDCDPDIENPGTEIRGNCGNPGMGIMFFCSYIIMSFLVVVNM
YIAIILENFNVAQEESGDPLCEDDFEMFDQTWEKFDIDATQFIQYNRVFDFVDALQEPLR
IAKPNRLKLITMDLPIVTGDKIHCLDILLAVTYEVLGDTIEMAAMRESIEAKFKMNNPTS
ASFEPITTTLRRKEEERAAIAVQRRYRRHLLKRAIRYACFMHRSKRKVRSQGEEEPPEAE
GLIARKMDALYGSNPELAKAFELQTRPMSPNARPPKPTSVTQHRVSVTYPRPQGQLILPV
ELTSEVILRSAPTPHGLCGSENVTIKESIV
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcctgctccctcccacaggcaccgacgtcttccggcgattcaccccggagtcg
ctggtggagatcgacaggctcatccacgagaggagcaccagggaggatgtagagggggtt
gagaaggagccacaggcaccgagcagtgatctggaggcaggaaagtgcctgccaatgatc
tatggcgacccaccaaaggatctcctcaacactcctctggaggacatagaccccttctat
aaaacacagaaaacttttatcgtcataagtaagggaaacacaatctacaggttcactgct
gaaccagcaatgttttgtatcagtcctttcagtcttgtcagaagaggagccatcaaaatt
cttatacattcattatttagtatgatcatcatgatcaccatcctgtccaactgtgtgttc
atgacaatgagtaaccctccagcctggagtaaaactgttgagtatgtttttactggtata
tacacctttgaagcaacaatcaaagttttgtctcgaggcttcttcatcggacctttcaca
ttcctccgtgatccatggaactggcttgatttcatggtgatcagcatggcgtacatcaca
gagtttgtagaccttggtaatgtgtcagcactgaggacgtttcgtgtgcttcgagctctc
aaaactatcacagttattcctggtttgaaaaccatcgtcggggctttgattcagtctgtc
aagaagatggtaaatgtaatgattttgactctttttgcactggctgtatttgccctcatt
ggccttcagctgttcatgggaaatttacgtcacaagtgcatccgttggcccattgccaac
agcaccatctttgatgactacaactccaccatggtcaatgacaccaccctcaacatcaca
gatactttcgatttcaaagcgtacatagacaatgaagaaaaccaatactttctggaagga
agtttagatgctttaatatgtggtaacagctctgatgcagggtgcccagaaggttacacg
tgtatgaaggctggacgaaacccaaactatggctacaccagctatgacaactttggctgg
gcatttctcaccctcttcagagtcatgactcaggactactgggagaatctctttcagttg
acccttcgtgctgctgggaagacctacatgatcttctttgtggtggtcatcttcctgggc
tctttctacctgatcaatctgatcctggccgtggttgcgatggcatatgacgagcagaat
gaagccaccttggctgaagctcatcagaaagaagaggagtttcaaagattacttgagcaa
ctcaggaaccaagagcaagaggcaggcagtaaagcatctttggccagccagacagcacaa
agtcaagggtccaacaggacaggttccctgcaaagtcttggcggtgatgatgtaataaag
gactgtaatggccgaatagtgccacgccttgttgtcaacagagcgtccattaacaaagag
ttatcagctgaagaggaccacaagtccatgagctccaaacacagcatgcagtacctggac
gagcccaaactctccaagagaacagctagtgctatcagtgtgctcactgcaactatggag
gagctggaagatgctcagaggccttgtccccctggctggtataagtttgctgatattttc
tttaaatgggactgctgcactccctggatcatatttaagaagtgggttcattttgtcgtg
atggacccatttgcggatctaggtatcaccatctgtattgtgctcaacacacttttcatg
gccatggagcactaccccatgagtccggatttcgaacatgttctctcagtaggcaacttg
gttatatttacaggaatcttcacagctgaaatggtgtttaagctcatagctatggacccc
tattactacttccaggtgggctggaacattttcgacagcatcattgtaacactcagcctg
gtagagttgggactggccaatgttcagggattgtctgttctcaggtccttccgtttgcta
cgtgtcttcaaactggctaaatcttggccaacccttaacatgctgatcaagatcattggc
aactcagtaggtgccctggggaacctaacgcttgtcctggccatcatcgttttcatcttc
gccgtggtgggcatgcagctttttggcaagagctacaaggattgcgtttgtaagatctct
caggactgcaagctgccccgctggcatatgaacgacttcttccactctttcctcatcgtc
tttcggatcttgtgtggagagtggatcgagaccatgtgggactgcatggaggtggcggga
gcgaccatgtgcttgatagtcttcatgatggtcatggtcattggaaaccttgtggtactg
aacctgttcctggccctgctgctcagctccttcagcggggataacctgtccggaggtgat
gatgatggggagatgaacaaccttcagattgccattggccgcatcaacaggggtgtagat
tggttcaaagccttcatcgccagtatgttgcgaaagattctaggaaagaaacctcctgaa
aataatgagggaggaggggaaggagacatagaactccatgctataaaccacctggatgag
gggaaaatcgaagagggcttgactaactgtttgcctccagcactgaccgtacccattgct
tgttgtgagtctgatgtggatgaggaagaggactctgatgaatctactgatgaggaggat
ggaaaggccactcttaatgatgacgactcttcagtttgtagcacagtggactaccggcct
ccagaacctgagcctgagcccgaagaggaagaagaaccagagcctgaagagccagagtcc
tgtttcacagaaggttgtgttaaacgatttacatgtttgaatgtagacatcacagcagga
tgggggaaaaagtggtggaaccttcgtagaacatgcttcaccatcgttgagcatgactac
tttgagacattcatcatctttatgattcttcttagcagtggagcactggcttttgaggat
atcaacattgagcgccgcagagtgatcaagactatcctggagtatgctgataaagtcttt
acatacattttcatagtggagatgttactgaagtgggttgcatatggtttcaaaacctac
ttcactgatgcatggtgctggctggacttcctcattgtggatgtgtcgctagtcagttta
acagccaatttattgggatattctgacctgggaccaatcaaatctcttagaacactcagg
gctcttcgaccccttcgagccctgtcaagatttgagggaatgagggtggtagtgaatgca
ctggttggtgccattccttctatttttaatgtgctgctggtgtgtctgatattctggctc
atcttcagcataatgggagtcaatctgtttgctggaaagttctaccactgcatcaacacc
actacggaggaacgcatcccgatggatgtggtcaacaacatgagtgactgtatggctctg
atgcacaccaatgaggcgcgctgggtcaatgtgaaggtcaactatgataacgtgggaaca
ggctacctctctctacttcaaattgccacatttaaaggctggatggatatcatgtatgct
gcagtggattctagagaggtggaagaccagccatcctatgagatcaacctttacatgtac
ctatattttgttattttcatcatttttggctcctttttcactctcaacctcttcattggt
gtcatcattgacaacttcaatcagcaaaagtccaagtttggagggaaagaccttttcatg
acagaggaacaaaaaaagtactacaatgccatgaagaagttgggttccaaaaaaccagcg
aaacctatccctcggccatcaaatgagatccagggtgtggtgtttgacttcataacacaa
cagttctttgacatctttatcatggtgcttatctgcctcaatatggtgaccatgatgata
gagacagatgaccagagtgctgagaaagaagaaattctgtatcagatcaatttgatcttc
atcgtcatctttacaggagaatgcgtacttaagatgtttgccctcagacattactttttc
actattggctggaacgtctttgattttgttgtggtcatcctttctatagcaggtcttatg
ttatcagacatcattgagaagtactttgtgtctcccaccttgttccgtgtgatccggctc
gccagaatcggccgtgtgctacgtctcatcagaggggcaaagggcattaggactcttttg
tttgccttgatgatgtcgcttcctgccctcttcaacattggactgcttctgttcctcatt
atgttcatcttctccatctttgctatggctaactttgcctatgtgaaaaagcaggcaggc
atcgacgatatcttcaactttgaaacatttggtggcagcatcatctgcctgtttgagatc
acaacctcggcaggatgggatgggcttttgctgcctattctgaacagcggccctccagat
tgtgaccctgacatagagaaccctggtacagaaattcggggtaactgtgggaatcctggc
atgggcatcatgtttttctgcagttatattatcatgtcgttcctggtggttgtgaacatg
tacattgctatcattctcgagaacttcaacgtcgctcaagaggagagtggagatccgctc
tgcgaggatgactttgagatgtttgaccagacgtgggaaaagtttgacattgatgctaca
cagttcattcaatacaaccgggtgtttgactttgttgatgccttgcaggagcctttacga
attgccaaacccaaccgcctcaaactaattaccatggatctgcccattgtaaccggcgac
aaaatccactgtctggatattcttttggcagttacctatgaggttcttggagacacgatt
gagatggctgccatgagggagagcattgaagccaagttcaaaatgaacaatcccacatct
gcctcgtttgagccaatcaccaccactctcaggaggaaagaggaagagcgcgcagctatt
gcggttcaacgaagataccggagacatctcctcaaacgtgctattcgctatgcttgcttc
atgcatcgttcaaagaggaaagttaggagtcagggcgaagaggaacctcctgaagccgaa
gggttaattgcaaggaaaatggatgccctgtatggcagcaatccagaactcgccaaggct
tttgagctgcagactaggccaatgtcgcctaatgcacggccacccaagcccacctcggtc
acacagcacagagtctcagtgacctaccctcgaccacagggacaactcatactaccagtg
gagctcacaagcgaggtgatcctccggtctgcaccgacaccgcatggcctctgcggttca
gagaatgtgacaataaaagagtcaatagtataa
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integrated database retrieval system
