Cyprinus carpio (common carp): 109065463 Help Entry 109065463         CDS       T05134                                  Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ccar  Cyprinus carpio (common carp) Pathway ccar04010   MAPK signaling pathway ccar04120   Ubiquitin mediated proteolysis ccar04140   Autophagy - animal ccar04144   Endocytosis ccar04620   Toll-like receptor signaling pathway ccar04621   NOD-like receptor signaling pathway ccar04622   RIG-I-like receptor signaling pathway ccar05132   Salmonella infection ccar05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ccar00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     109065463  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     109065463  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     109065463    04140 Autophagy - animal     109065463  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     109065463    04621 NOD-like receptor signaling pathway     109065463    04622 RIG-I-like receptor signaling pathway     109065463  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     109065463   09171 Infectious disease: bacterial    05132 Salmonella infection     109065463  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccar04131]     109065463    04121 Ubiquitin system [BR:ccar04121]     109065463 Enzymes [BR:ccar01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      109065463 Membrane trafficking [BR:ccar04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     109065463 Ubiquitin system [BR:ccar04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     109065463 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX TRAF3_RING zf-C3HC4_4 zf-RING_5 TRAF6_Z2 DM RING_XB3-XBAT31 zf-TRAF_2 U-box FrsA-like PUMA_CC DUF4472 zf-RING_11 Motif Other DBs NCBI-GeneID:  109065463 NCBI-ProteinID:  XP_042616584 UniProt:  D6PXE7 LinkDB All DBs Position A7:complement(28026435..28033429) Genome browser AA seq 543 aa AA seqDB search MACSDMEKLSLDVDPYCDSDLSGCAAAMEKERESYLSPTENPSTISVSASIPPDQQGYDV EFDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLLEEQLF PDNFAKREILSLTVRCPNVGCSDKMELRQLEKHLSHCKFATVPCPQCLESVRKSHLDEHK SQQCLQRLMTCPACAGSFVYANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKA PVACTFSTFGCREKMPRNELAQHMQEFTQMHMRYMAEFLRSQSLSSCPVPSIAAHSSSDE RGATARAPESCQCKPELMNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRRKLS SLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHL QTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEGEHHVEVMETKPDLQA FQRPTVLRNPKGFGYVTFLHLQVLQQRGFVKDDVLLVRCEVTPRFDASLRREGVQPRGSE PSL NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atggcttgcagtgacatggagaagctcagcctcgatgtggatccctactgtgatagcgac ctctcgggttgtgcagcagccatggagaaagaaagggagtcctatctgagtccgacagag aacccctccaccatcagtgtctctgctagcatccctccagaccagcaaggctatgacgtg gagtttgaccctccgctagagagcaagtacgagtgccctatctgtctgatgggtctccgc tccgcagtacagaccccatgtggacatcgattctgcaactcatgcatcaagaagtctatc agggacacagggcaaaaatgtccagttgacaatgaggtgctgcttgaggaacagctcttc cctgataactttgccaaacgagagatcctctcacttactgtccgatgtcctaatgtagga tgcagtgataaaatggagttgcgccaactggagaaacacttgtctcattgtaagtttgcc acagtgccatgccctcagtgtctggagtctgttcgtaagagccatctggatgaacacaag agccagcagtgtttacagcggctcatgacctgccctgcctgtgcagggagctttgtgtat gctaataaacagattcatgaacagatttgtcctttcgccaatacagtgtgtgaatattgc gaaatggagcttattcgggatcagttggcattgcactgtgacacagactgtcttaaagct cctgtagcctgtactttcagcacttttggttgtcgtgaaaagatgccaagaaatgaactg gcccagcacatgcaggaatttacacagatgcacatgcgttacatggctgagttcctgcgc agccagtcactcagtagctgcccagtgccgtcaattgccgcccactcttcatcagacgaa cgtggagcaactgcccgagcgccagagtcatgccagtgtaaaccagagctgatgaatctg cgggagacagtcttggagctggagggtcggctggttcgtcaagatcaacagatccgggag ctgtgcatccacaatgagacacaaaaaaaccaggtcacagagctacgccgaaagctgagc tcactggaggaggccacccgagagctggaagcccagcagtatcaaggtgtctacgtatgg cgtttggagaacttctcacttcacctgcgcaaccaagaggctggtcaacccatagtcctc cacagcccacctttctacacgggccggccagggtacaaactctgcctacgactgcatctg caaactcccaatgccccacgctgttccaattacatctcacttttcgtgcacactatgcag ggtgagtttgacagccagctctcctggcccttgcagggcacgatccgactggcagtgttg gaccaggtcgagggggagcatcatgtggaagtgatggagaccaagccggacttgcaggca ttccagaggcccactgtcctgcgcaaccccaaaggtttcgggtacgtcactttcctgcac ctacaggtgttgcagcagcgtgggtttgtgaaagacgacgtgctgttggtgcgctgcgag gtgacaccacgatttgatgctagcctcaggagggaaggggtccaacctcgggggtcagaa ccttcactttga

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