Cyprinus carpio (common carp): 109067118
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Entry
109067118 CDS
T05134
Name
(RefSeq) interferon regulatory factor 6-like isoform X1
KO
K09446
interferon regulatory factor 5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109067118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109067118
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109067118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109067118
NCBI-ProteinID:
XP_018939668
Ensembl:
ENSCCRG00000020746
UniProt:
A0A8C1IQC0
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All DBs
Position
A4:complement(9282253..9290196)
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AA seq
517 aa
AA seq
DB search
MSGQPRRIRLKPWLLAQINSGKYPGLHWLNQERRLFRIPWRHATRHMPTLEEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFGLHYDGTKDTPVQPYKIYEVCDQSVNG
DAGDDEEEELQNFVKLSIDPSSYSAYPSRVDVPFTSTIADGYNPTHHNPPMNLLRDVVHN
NPSGSAPMTSHLSQPSTGPSAGSLTEFPSHSAIKVEQAQYPCGGLPNGLGMETGVIPPPL
LQDVVTHSVGPPAMVDSPMQEVPVQAENQVHPCISELLSSPHMLPLTDLDIKFQYRGRTA
GSLTVSNPQGCRLYYGNLAPTPEQVELFGPVTLQQVLFPGTAEIQNEKQRFYTDHLLDVM
DRGLILEIRGQDIYAIRLCQCKVFWSGPGVAEQGPPNPMEREMKIKVFSLNNFLHGLILY
QKGEAPTPPPFEIYFCFGEDWPDRKPKEKKLIVVQVVPVVARILTEMFSGELSWSTDSIR
LQISNPDLKDQTVEQFKELHRLLQSQNAHHTWAQNIH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcaaccacggaggatccgtctgaagccatggctgctggcacagattaacagt
gggaaatacccaggactgcactggctcaatcaagagcgcagactgttccggatcccatgg
agacatgccacacgccatatgcctaccctggaggaggagaacactatatttaaggcttgg
gctctcgaaacaggcaagtatcaggaaggagtagatgagccagatccagcaaaatggaaa
gccaatctccgctgtgccctaaacaaaagccgagagtttggactccactacgatggcacg
aaggacacccccgtccagccttataagatctatgaggtgtgcgaccagtcagtcaatgga
gatgccggagacgatgaggaagaggagctgcaaaactttgtcaaactctccattgaccct
tccagctactcagcatacccttctagagtagacgttccgttcacctctactattgctgat
ggctataatcccacccaccataaccctccaatgaacctcttaagagatgttgtccataat
aaccccagtggaagtgctcctatgacctctcacctctcccagcccagcaccggcccttcg
gctggttctttgactgaatttcccagtcacagtgcaatcaaagttgagcaggcacaatac
ccctgtgggggacttccgaacggtctgggaatggagactggggtcataccgcctcctctt
cttcaagatgtagtcactcattctgtaggccctccagccatggtggacagcccaatgcaa
gaggtgccagttcaagcagagaaccaggttcatccctgcatctcagagttgctgagcagt
ccgcacatgttgcccttaactgatctagatatcaagttccagtacaggggtcggacagct
ggttctttgactgtcagcaaccctcagggatgtagactttactacggtaatctggcgccc
acaccagagcaagtagagctgtttggtccggtaacgctgcagcaggtgctgttcccagga
accgctgagatccagaacgagaagcagaggttctataccgatcatctactggatgtgatg
gaccgagggctgattttggagatcaggggacaagatatctatgccatcagactgtgccag
tgtaaagtgttctggtccgggccaggtgtggccgaacagggtccgcccaatccaatggaa
agagaaatgaagatcaaggtcttcagtctgaacaacttcctccatggtctcattttgtat
cagaaaggagaggcgcccactccaccaccctttgagatctacttctgtttcggtgaggac
tggccagacaggaagcccaaggagaaaaagctcatcgttgtccaggttgttccagttgtt
gcaaggatccttaccgagatgttttcaggcgagctttcgtggtccacagacagcattcgg
ttgcagatctccaaccctgacctgaaagaccaaacggtggagcagttcaaagagctccac
agactgttgcaaagtcaaaatgcgcaccacacctgggctcaaaacatccactaa
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integrated database retrieval system
