Cyprinus carpio (common carp): 109067433
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Entry
109067433 CDS
T05134
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109067433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109067433
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109067433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_5th
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_1st
Ig_NUP210_16th
Ig_NUP210_8th
Ig_NUP210_6th
Ig_NUP210_9th
Ig_NUP210_4th
Big_2
Ig_NUP210_14th
NUP210_Ig
HL_N-beta
MnhB
Motif
Other DBs
NCBI-GeneID:
109067433
NCBI-ProteinID:
XP_042596862
UniProt:
A0A9Q9X7V7
LinkDB
All DBs
Position
B16:14321851..14347289
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AA seq
1882 aa
AA seq
DB search
MLVIERAVWGVLLMSSLITLSKSTKLNVPKLLLPLSTRVPVNITLTAQRGCYKWVSFKPE
TVRVYPLSAHSPPALLPLSSCSQQCLVSALSSPQAVPLRTVVQAQDPVTGHILRCDVIIN
RIESIQVVTTIRQLFTNDPPLQLSVRAFDSEGNTFSCLAGLKFNWRLAKESDAIQAVRFV
RHHDAGYAPPPHILSLEDAGQWGESVLLYGIHSGSALIKVSFLHPEHKHVEAASVTLFVI
DRLHLSPVGDTYLLQGSTIRYTLWKTEQEGETEVTLSEEGYSLVVDGYKGRMYDHDIISV
EQDTATVTALKLGHATLTVTHNNLPPQITSQLPRTSVYVVNPSYMTLSIKEEEDRWVLET
GRQYYLTVRIHDNKGHVVHLSQNVVIVVEETEGLVTLESLSDPACHLLQTIMKGKTLIQA
LLYSIVSEDGECWPVIPPIRVQQEVEIYKPLTLQPSVIVFPWQPHNKLYQHNIQVEGGSG
SVTWEVSDREIATVTVKGVVIAGKRRGHAEIQVSDSKNILHKVVGKVMVVRPARLQLIPQ
RGDCRVGDSIDIPFALWGIQDPPNTCSQNSNLFSETHNLQCGEFLLEDRNLVLVTDCSQL
CLHIHTEPAGIFTHMSGSLSPGAGFCGGVRMGALSRGHAVVTITVEIEGCNISETTTLVA
YSPLKSLVSEVLLSVGSSHEVIFEGGPQPWALAPLRFFSDVEVQPEGGVTVEALSPAEAM
PARYAYQVTCTAVGAQWLVFRCGNTPGPLNEILTVEESRVQVACGVPAGLSLSLLSSPSS
PSSVHYSCTQPHYPCGLLSVSSTRDATLQLSVFDQKGVQFDNFTSCSVRWTSSDPGLLSL
SPQFTMKVDDRLTQTGYKLHAWQVLQAHGQTGTVTVNATLTCPEMLTAPVSQCVNLRLVD
DVQWTRHSVTLFNHPKVTENLTLIHGSGRFHAHLQDNQLASINQENSNVIQVSPLQTGSS
VLKAHDLCLTSDPAVASFLVSDIKDFQIDFISNIEVRHSAVVRVRVLDSNNQPFLHHYLL
LMNLMLIPSSSIISVEDTGPVDKYSVGFRVTGLTVGVVSFHLSAVDGHGFVISSSHKNVQ
VYPPFSLQPHKLTLAVGSVRQVKWEGGPHPQYGVKFSMSDSSIAVVTEIGLVRGVAVGVV
KLRAAPQTQNKEASLTFLQDEVEVEVFNLTAVRIQAPLVTLSVGKEMPVYVMGSDSSQNP
LSLGSVESGLSFHWSLSKAGVLEIKPRHAQVGVSVSPSHSFSVLVRARAPGRTSLKVCVQ
LQQIDTSNTSLSDHLTDEIQILVFEEMQLTAGSSESILMSPLSQYLLRSNKDSVCPVHYT
FSRCVSGAGLVTIDNEGVLKTGPDTGLAVLEVYAMDICGINQALLISVEVSTAWFVRILT
VSSVNSDSDRALPAFPLGWSIRIRALYYDNMGRQFQSHNIQTLVTANRDDLVQLIVDKDS
RSFLVQTASPGLTVLRVQGDTTNPFLSDYTPLFVMPAIPEPTGCLRSGDVICFSSPITDQ
QGQRGRWDVSSSEILQMNSETGVAFAKNSGTVVVYYRLEGGQQTFKEVTVEPASIPVFIP
PADRLLTNWPEASEYTVRVDLNTSAANTAQCSLDQWEVIEKKLHPEAELLCSLHFGAPYP
EMRILQAIFNATPFYNSATAQYSCRISVQPQSDSILHLLSTRSLSIHLSACLRTQLAPAA
LLSLPQTPHSFQSSLQLPYVPAFHCPVTKIKLSSQQPEAEITVFGTTDMLSTLRVQSDTP
DIVLSDPVWSDEDPTLLLISVYPTLHFLDQVPSTASISLYTDLSPQKHIVLVTRVMDDPE
SGHLGTSSGHLFISVFALFAVLATAAALFIAYNTMLSLPQTVHAVLTPSTNTEDSQHFYL
WLTPSLPKPKILQRKQWLWSTK
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgatagagagagcagtttggggggttttgctaatgagctcattgattacactc
agtaagtcgactaaactgaacgttcccaagctgctgctacctctcagcactcgtgtgcct
gtgaacatcacactgacagcacagagaggatgctacaaatgggtgtcctttaagcctgag
actgtcagggtgtatccgctctccgcacacagccctccggctctgctgcccctctcctcc
tgcagtcagcagtgcttggtgtcagctctgtcctccccccaggctgtccctctccgtact
gtggtccaggcacaagaccctgtgaccggtcacattctgcgctgtgatgtcatcatcaat
cggattgaaagtattcaggttgtcacaaccattcgacagctttttaccaacgaccctccc
ctgcagttatctgtccgggcatttgactcagaaggaaatacttttagctgtctggctggc
ttgaaatttaattggcggctggcaaaggagtctgatgcaatacaggcagtgaggtttgtg
cgtcaccatgatgcggggtacgctcccccacctcatatcctgtctctagaagatgctggt
cagtggggggagagtgtcttgctgtatgggattcacagtggctcagcacttataaaagtg
tcttttcttcatcctgaacataagcatgtagaagcagccagtgtgactttgtttgtgata
gacagactgcacctgagtccagtgggagatacatacctgctacagggatccaccatcaga
tacactctgtggaaaacagagcaagaaggagaaactgaggtcactctgtctgaggaggga
tacagtctggttgtggacggatacaagggcagaatgtacgatcatgacatcatatctgtt
gagcaggacacagctactgtcaccgccctcaagctgggtcatgcgacactaacggttaca
cacaacaatctgccccctcaaataacgtcccaacttcctcggacttctgtgtatgtggta
aatcccagctatatgacgttgagtattaaagaggaagaggacagatgggtgttggagacg
gggcggcagtattatttgactgttcgtatccatgacaacaagggccatgtggttcacctg
tcacagaatgtggtgattgttgtggaggagactgaggggttagtgacactcgagtctttg
tctgatcctgcctgccatctcctgcagaccatcatgaaagggaagactttaatacaggcc
ttgctttatagcatcgtctctgaggatggtgaatgttggcctgtcatcccaccaatccga
gtgcaacaggaagtggaaatctacaagcctcttactctacagccctctgtcattgttttt
ccatggcaaccccacaataagctgtaccagcacaatattcaggtggaaggaggaagtggc
tctgtgacgtgggaagtgtctgatagagaaattgccacagttacagtaaaaggggtggtc
atagcaggaaaaaggaggggccatgctgaaattcaggtttcagattccaaaaacatcctg
cacaaagtagtcgggaaggtgatggtcgtgaggcctgcccgtttgcagctgattccccag
aggggcgattgtcgtgtgggtgacagtatagacattccctttgctctctggggcattcag
gacccaccaaacacttgttctcagaactcaaacttgttctccgagactcacaatcttcaa
tgcggagagtttctactggaggacagaaatcttgtgttagtcacagattgctctcagctc
tgtctacacatccacactgaacctgctggcatcttcacacacatgtcaggatctctgtct
ccaggtgctggattctgtggaggggtccgtatgggggctctttcacggggccacgctgtt
gttaccatcacagtggaaatagagggatgcaacatcagtgagacgacaacactggtggcc
tacagtcctctcaaatctcttgtgtctgaggttcttctctcggtgggctcatctcatgag
gttatatttgagggggggcctcagccctgggccctggctcccttacgtttctttagtgac
gtcgaggtgcagccggaggggggtgttaccgtggaggcgttgagtccggccgaagcaatg
ccagctcgatacgcatatcaagtcacgtgcaccgccgtgggagcacagtggttggtcttc
aggtgtggtaatactccaggtccattaaacgagattctcacagtggaggagagcagagtt
caggtggcgtgtggcgttcccgctggtctgtctctctctcttctctcctccccgtcctca
ccttcatccgttcactattcctgcactcagcctcactacccctgtggactgttatctgtg
tccagcactagggatgcgacgttgcagttgtctgtgtttgaccaaaagggggtgcagttt
gataatttcacttcctgttcagtgaggtggacctcctctgaccctggtctgctctcactg
agcccccagttcacaatgaaagtggatgacagactaacccagacgggatacaaactgcat
gcctggcaggttcttcaggcccacggacagacaggaaccgtgactgtcaatgccacacta
acatgtccagagatgttgacagctccagtgtctcagtgtgtgaatctgcgtttggtggat
gacgtacagtggaccagacactctgtcacattatttaaccatccaaaagtcacagaaaat
ctgaccttgatccatggctcgggtcgctttcatgcccatctacaagacaaccagttagcc
agcatcaatcaggagaacagcaatgtaatacaggtgtctccacttcaaactggatcttca
gttcttaaggcacatgacctctgtctgacctctgatcctgctgtggcctcctttcttgtt
tctgatatcaaagatttccagattgacttcatcagtaatattgaggtcagacattctgct
gtagtgcgagtgcgtgttctggactcaaataatcaaccatttcttcatcactacctgttg
ctcatgaacctcatgcttatcccttcttcatccatcatttctgtggaggacacggggcca
gtggacaagtacagtgtgggattccgtgtgactggcctgacagtgggcgtggtcagtttc
catctctctgcagtggatggccatgggtttgttataagctcctcccacaagaatgtgcaa
gtttaccctccgttcagtttgcagccccataaacttactctggcagttggaagtgtgcga
caggtgaaatgggagggagggcctcatcctcagtatggggtcaagttctccatgagtgac
agctctattgccgtggtaactgagataggactggtcagaggcgtggcagtgggtgtggtc
aaactcagagcagctcctcagacacaaaataaagaagcatcacttacatttttacaggat
gaagtggaggtggaggtgtttaacctgacagcagtgaggatacaggctcctttagtgact
ctatccgtaggaaaagagatgccggtttatgtgatggggagtgacagcagtcagaaccct
ctatctctgggtagtgtcgagtctggcctcagtttccactggagtctaagcaaagcgggt
gtgctggagatcaaaccaaggcatgcacaggtgggcgttagtgtgtctccctctcacagt
ttctctgtgctggtgagggccagagctccaggcaggaccagcctcaaagtgtgtgtgcag
ctccaacagatagacaccagcaacacatcactctctgatcatctgactgacgagatacag
atactggtgtttgaagagatgcagttaacagcaggaagctcagaatccatcctcatgtct
cctctctctcagtacctcctgcggagcaataaggactcagtctgtccggtccactacacc
tttagccggtgcgtctcaggggcagggcttgttactattgataatgaaggagtgttgaag
acagggcctgatacaggccttgcagttttggaggtttatgccatggacatttgcggtatc
aaccaagcactgctgatcagtgtggaggtgtcaacagcttggtttgtacggattttgact
gtgtcatccgtgaacagtgacagtgatagagcacttcctgccttccctctgggctggagc
atccgtatcagggctctttactatgataacatgggacggcagttccagtctcacaatata
caaacactggtcacagctaacagagatgaccttgtgcaactgatagttgacaaagacagt
cggtcgtttctggtgcaaacggcatcacccggtctaactgttttgagggtgcagggagac
actacaaacccatttctgagcgattacacccctctgtttgtgatgccggccatcccagag
cccacaggatgcctgcgctctggggatgtgatctgtttcagctctcccattacagaccag
cagggtcagcgaggcagatgggatgtgtcatcaagtgagatccttcaaatgaactctgag
actggagtggcatttgcaaagaattctgggacggtagtggtttattacaggctagaaggg
ggacagcaaaccttcaaagaggtaacagtggagcctgcgtccattcctgtattcattcct
cccgctgacaggctcctcactaactggcctgaagcttcagaatacaccgtcagagtggat
ctgaacacctctgctgccaacacagctcaatgcagtctagatcagtgggaggtcatagag
aagaaattacatcctgaggcagagctactgtgctctttacactttggcgccccctatcca
gagatgagaatactacaggctatctttaatgcaacacccttctacaattcagccactgct
cagtacagctgcaggatctctgtgcagccccaatcagactccatcctccatctcctgtcc
actcggtcgctctccatccatctgtctgcctgtctgcggactcagttagccccagctgcc
ctgctgtcacttcctcagacaccacactcttttcagtcgtcccttcagctcccgtacgtg
ccagccttccattgtcccgtcactaagatcaaactttcctcccagcagcctgaggctgaa
atcacagtgtttggcactacagacatgctcagcacactgagggttcagtcagacacccca
gacatcgtgttatctgatccagtctggtcagatgaagaccccactcttctccttatttca
gtctatccaaccttacatttcctggatcaggtaccgtctactgcaagcatttccctgtac
acagacctttctccacaaaagcacattgtattggtgactagagtgatggacgacccggag
tcaggtcatcttggaacaagttctggccacttgttcatttcagtatttgctctgtttgct
gtactggccaccgctgctgcacttttcatagcgtacaataccatgctgtctctcccacag
actgtacatgcagtcctcacaccctctactaatacagaagacagtcaacatttctacctg
tggctcacaccatcactgccaaaaccaaaaatcctgcagagaaaacagtggctctggagt
accaagtaa
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