Cyprinus carpio (common carp): 109067630
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Entry
109067630 CDS
T05134
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109067630 (trpc6a)
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109067630 (trpc6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
RIN1
FlaX
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
109067630
NCBI-ProteinID:
XP_042566797
Ensembl:
ENSCCRG00000019838
ENSCCRG00000046506
UniProt:
A0A9Q9ZMB2
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Position
A21:complement(11626396..11634135)
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AA seq
874 aa
AA seq
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MNQRRPVLEDGNPPKYHTIEKRNRSKDNLLMNEDFGEDSYGSYGHYHGESLARQALPKSR
RQAVRGAAYMFNAHPNSLTPVEERFLDAAEYGNIPVVRRMLEEIPELDVNCVDYMGQNAL
QLAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYTRIVEAILSHKAFADSKRLTASPS
QAPMHDDFFAYDEDGTRFSHDVTPIILASHCHEYEIVHILLGKGARIEQPHDYFCTCDTC
NYHQKYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEY
RKLSMQCKDFVVGLLDLCRSTEEVEAILSGEDDETLEVPGRPSLIRLKLAIKYELKKFVA
HPNCQQQLLSIWYENLPGLRQQTTAIKFLVVLGVAVGLPFLAMLYWVAPCSKMGKIMRGP
FLKFVAHAASFTIFLGLLVMNAADRFDGTKLLPNMTIHDYPTQLFRMKTTPFTWMEMLII
FWVIGMIWAECKEIWSQGPREYLVEPWNLLDFGMLAIFVASFISRIMAFWHACVAQCYVD
EHYTDLTNVTLPFEVGYFQLARIDWFPSDPQLVSEGLYAIAVVLSFSRIAYILPANESFG
PLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNEAFTTVEESFKTLFWA
IFGLSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINSSFQEIEDDADVE
WKFARAKLWFTYFEEGRTLPVPFNLVPSPKSVLGLVMGVKGLLQEIFNRHKAIVKGSELS
ELGQSKTCQVKPLPSPSRYQKIMKRLVKRYIIKAQNDKECDEVNEGELKEIKQDISSLRY
ELLEEKSHNMEELAKLVRTLEKNLSQECLMLKSN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaggagacctgttctggaggatggaaatcctccgaagtatcacacaattgaa
aagaggaacagaagtaaagacaatctactgatgaacgaagactttggagaggacagttat
ggcagttatggacactaccatggtgagagcctggcccgacaagcgttacccaagagcaga
aggcaggcggtgcgaggggcagcctacatgttcaatgcccatcctaacagcctaacccct
gtagaggaacgtttccttgatgccgcagagtatggaaacatacctgtggtgcgccgaatg
cttgaggagatcccggagctggacgttaactgtgtggactacatgggccagaatgcattg
cagttggcggtggcaaatgagcacttagaagtaacagagctcttgttgaaaaaagacaac
ctgtcacgtattggggatgcacttttgttggccatcagcaaaggttacaccaggattgtc
gaggccattttgagccacaaagcttttgccgactccaagagacttacagcaagccctagt
caggctccaatgcatgatgacttttttgcgtacgatgaagatggcacgcgcttttctcat
gacgtcactccaatcattctagcatctcattgtcacgaatatgaaatcgtgcacattctt
ctgggaaagggtgctcgcattgagcagccacatgactacttttgtacctgtgacacctgt
aattaccatcaaaagtatgattctttctcccactctcgctcgcgtatcaatgcctacagg
ggactggccagtccagcgtacctctctctatccaatgaggatcctgtgttggcagccctt
gagctcagcaatgagttggcttccttggccaatattgaaaaagaatttaagaatgaatat
aggaaactttctatgcaatgcaaagactttgttgtgggacttctggacctatgtcggagc
acagaggaagtggaagccattctgagcggtgaagatgatgagactttagaagtgcctgga
cgaccaagtctcattcgcttaaaactcgcaataaagtacgaactgaaaaagtttgtggcc
catcctaactgtcagcaacagctcttatcaatatggtacgaaaacctgcccggactcagg
cagcagaccactgccattaagttcctggtggttttaggtgttgcagtcggacttcccttt
ctagcaatgttgtattgggttgcaccatgcagcaagatgggaaagattatgcgtggccct
ttccttaagtttgtggcacacgcggcctccttcactattttccttggccttttggtcatg
aatgctgcagaccgctttgatgggacaaagctgcttccaaatatgaccattcatgactat
ccgacgcagctgtttcgtatgaaaacaactccctttacatggatggagatgctcatcatt
ttctgggtcatagggatgatttgggcagagtgcaaggagatctggtcccaaggtccaaga
gaatatctggttgagccttggaatttgctagactttggaatgttggccatttttgtggca
tccttcatctcaaggataatggctttctggcatgcatgtgtagcacaatgctatgttgat
gagcactacactgatttgaccaatgttactttgccttttgaggtgggatacttccagttg
gctcggatcgactggttcccgtctgatcctcagttagtttctgagggcttgtatgccatt
gcagtggtcctgagcttttcgcgaattgcgtacatcctgccggcgaatgagagctttggt
ccattgcagatatctttgggacgaactgtgaaggacatcttcaagttcatggttatcttc
attttagtgtttctggccttcatgattggaatgttcaacctctactcatattatcggggc
gctaaacagaatgaagctttcacaactgtagaggaaagcttcaaaacattgttttgggca
atatttggcctttctgaggtcaaatcagtagtcgtgaacaatggacacaagttcatcgag
aacattggctatgttctctatggagtttataatgtcacagtggtcatcgtcctgctcaac
atgctcattgctatgatcaacagttcctttcaggagattgaggatgatgcagatgtggag
tggaagtttgcccgggccaagctttggttcacttactttgaggagggccggactctccct
gtgccttttaacttggttcccagtcccaaatctgttctgggtttggttatgggggttaag
ggtcttttgcaggagattttcaatagacacaaagccattgtgaaggggtctgagctcagt
gagttgggacagagcaaaacttgccaggtcaaacctcttcctagccccagtcgatatcag
aaaattatgaagcgtcttgttaagcgatacatcatcaaagcccaaaatgacaaagaatgt
gatgaagtcaatgaaggtgaactgaaggagattaagcaggacatttcaagccttcgctat
gagctgctggaggaaaagtcacacaacatggaggagctggcaaagctagtgaggacactt
gaaaaaaatctctctcaggaatgcttgatgctgaagtctaattaa
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