Cyprinus carpio (common carp): 109071543
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Entry
109071543 CDS
T05134
Symbol
lgi1a
Name
(RefSeq) leucine-rich glioma-inactivated protein 1a
KO
K25428
leucine-rich repeat LGI family member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109071543 (lgi1a)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
Rax2
CENP-N
LRRCT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
109071543
NCBI-ProteinID:
XP_042592226
Ensembl:
ENSCCRG00000036297
UniProt:
A0A9Q9X0A5
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Position
B13:complement(3947777..3959144)
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AA seq
538 aa
AA seq
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MGLRRTMFFCFLCSLMLALDASRRRHARCPASCTCSKDNALCANTGSIPRSFPPDVISLS
FVKSGFNEIPKESFIHTPALHLLLFTANNFDSINEDAFLGLPHLEYLFIENNQIKSISPF
AFRGLKSLIHLSLAYNNLETLPKDLFKGMEALTKVDLRGNLFSCDCKLKWLVDWMFHTNA
TVDQIFCNGPEAYQGKKINDLVAQSFDCITTDFSLLKSLDFQSISVEAFGFGGDQFVVFA
QPFIGRCSFMEWDHVQMEFRNFDNITSTSTVICKPLVIDSQLFIIVAQLFGGSHIFKRDV
SANKFIKIQDIDILKVRKPNDVEIFHVDEESFFIIADSSKAGSTTIYKWNGNGFYSHQSL
HPWHRDTDVEYLEISGKPHLILSSSSQRPVIYQWSKSTKQFERRTDIPEMEDVYAVKHFT
VKSELYICLTRFIGDSKVMKWDGSMFTEIQTMASRGSMVFQPFSIANWQYAILGSDYAFT
RVYRWDAKKRQFIHFQEMNIQAPRAFSLVFIDNREFLLGSSFKGQTRIYEHLVLDLSS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcagaaggaccatgttcttctgcttcttgtgctcgctgatgctggctcttgac
gccagccgcaggagacacgcgcgctgccccgcttcgtgcacgtgcagcaaagataacgcc
ttgtgtgccaataccggatcaataccgaggagcttcccgcctgatgtcatctcactatcg
ttcgtcaagtccggctttaatgaaatccctaaagagagtttcattcacacgccagccctc
catcttctacttttcacagcaaacaactttgattctataaatgaagatgcgtttcttggt
cttcctcatctggagtatcttttcattgaaaataaccaaatcaagtccatatcgccgttc
gccttcagaggactcaagtccttaatacatttaagtttggcgtacaataatttggagaca
ctaccgaaagatcttttcaaagggatggaagctctgactaaagtggatctgagaggaaat
cttttcagctgtgactgtaagctaaagtggttagtggactggatgtttcatacaaatgca
actgtggatcagatcttctgcaatggccctgaagcttaccagggcaagaagatcaatgac
cttgtggcacagtcatttgattgcattacaacagatttttcattgttgaagtctcttgac
tttcagtccatttcagtcgaggcttttgggtttggtggtgaccagtttgtagtgttcgcc
cagcctttcattggcaggtgcagcttcatggaatgggatcacgtgcaaatggagttcagg
aactttgataatatcacaagcacttccactgtcatctgcaaacctctagtcattgatagt
caactcttcattatagtagcccaactgttcggcggctcgcacatcttcaagcgagatgtc
tctgcaaacaaattcatcaaaatccaagacatcgacattctgaaagtccgaaagccaaat
gatgtggaaatcttccatgtcgacgaagagtctttcttcatcatagccgacagctccaaa
gccggctcgacaactatttataaatggaacggcaacggcttctactcccatcagtctttg
cacccctggcaccgtgacacagatgtggagtatctagagatttctgggaagcctcatctg
atcttgtccagcagctctcagaggccggtcatttaccagtggagcaagagcactaagcag
tttgaacggcgtacagatatcccagagatggaggatgtgtacgcggtcaaacacttcacc
gtgaagagcgagctctacatatgcctgacccgcttcatcggtgactccaaggtgatgaaa
tgggacggtagcatgttcactgagattcagaccatggcctctcgtggctccatggtcttc
cagccgttctcgatagccaactggcagtacgccatcctgggcagcgactatgcctttact
cgggtctatcgctgggatgcaaagaaaagacagttcattcacttccaagaaatgaacatt
caagcacccagggctttttctctggtgtttattgacaacagggagttccttcttggttct
agttttaaggggcaaacacgtatatatgaacacctggtccttgacttgagtagctga
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