Cyprinus carpio (common carp): 109071606
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Entry
109071606 CDS
T05134
Symbol
kdm2ab
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109071606 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109071606 (kdm2ab)
04121 Ubiquitin system [BR:
ccar04121
]
109071606 (kdm2ab)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109071606 (kdm2ab)
Enzymes [BR:
ccar01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
109071606 (kdm2ab)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109071606 (kdm2ab)
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109071606 (kdm2ab)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109071606 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
109071606 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_6
JmjC
PHD
Cupin_8
Rubredoxin
LRR_8
Motif
Other DBs
NCBI-GeneID:
109071606
NCBI-ProteinID:
XP_042625791
Ensembl:
ENSCCRG00000021311
ENSCCRG00000023754
ENSCCRG00000023997
UniProt:
A0A9R0B9T5
LinkDB
All DBs
Position
A14:complement(9032277..9044423)
Genome browser
AA seq
1261 aa
AA seq
DB search
MEEDSSRYSKRLRTGTRRRYQDDSISDDEIEGKRSFDVDEKLQSDRYNSDLVKIMDGKDF
TLEYIQREGLRDPIIFKKADGLGLKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPPSEREKLYNVISLEFSHTKLEHLVKRPTSVDMIDWVDNMWPRHLKESQR
DSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKASMCQRIELKQGYTFMIPSGTHAVYVXIETLVFGGNFLHSF
NIPMQLNIYNIEDRTRVSTQTSTRLFHCCPFVSFFXLSLCLWFVVQFYKEDVIKQGGFNG
QEENVVKDEEEEMVKEEPEPEEEAASPARPGVKVHLTPFELQGLWELLHKLEELPAHKKC
VPSGIRNAPALLSDIRKLLEEHANDNPKLSYTGKPIVKWPKRPSWYQPPPPLSLLYRPRA
PGSAPVLPPVPRPVKPSSSISALRRRRVRCKRCEACLRTECGDCNYCRDMRKFGGPGRLK
KSCVLRQCLAPALPLTAVCAICKEGYQESVDSESVQTLMECSECAQITHPECIKVPGEGI
INKDLPSCWECPKCVQGKKIESSSSSEEDTDSSVSNGSRLSGPPAKRAYREGIGVGGLRI
GRRGRPPLSFSSLPLTRSRRQPPPSQRLLLQHQQNRRRAGALELQLRKRIKLERNKIIQS
TRSSVSLSPKLLRQRSLERGGVVRAGPGRSISRGRGMSSCRGRGVRLRGGGRGGGLRERM
EMEVERDDSVEEEQEERKENGQYNGKENRPQRPGGKAGEDENGESHRNGESEGSSEGGEA
TPSDTSVVLSDDVRGQGSCVTVTLQPSRGRRDPSAIVPKLEANLSSRSLPQNHKALLRPP
LRNGAPRSDGPHSPADRLHVNKSHALLSSPHTLTRSASKHSHMVRSLRSNFRDSPHRLTR
ERIGKKARSEKAKSSDSCPSSTLRPSAEQNGGNEPGWEREVWVSVFRYLTRAELCVCMAV
CKSWYKWGCDKRLWTRISLSRCRSISPQALTGIIKRQPVTLDLSSANISKKQLSWLINRL
PGLKDLVLSGCNWASVSALSSPSCPLLRSLDLSWADGVKDAQIRELLNPPGSDNRSQMKN
MQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSSTRNTLTHLNL
AGCSRLTDRCLVYLRRLSCLSVLDLRDCKGVSRQACESFISELSVNALYCLSDDKLIQRI
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacagttcccgttatagcaaacgcctgcggactggcacacggcggcgatac
caagacgacagcatttcagatgatgaaatcgaagggaagaggtcctttgacgttgacgag
aaactccaaagtgatcgctacaactccgatctggtcaaaattatggatgggaaagacttc
accttggagtacatccaacgggagggactccgggaccccattatcttcaaaaaagcagat
ggtcttggcttaaagatgcctgacccagactttagtgtcagtgatgtgaaattgtttgtg
ggcagtcgcaggatggtggatgtgatggatgtgaccactcaaaaaggcattgagatgtca
atgggtcagtggaggagatactatgagacgccgccttctgaacgtgaaaagctgtacaat
gtgatcagcctggagttcagtcacacaaaactagagcatctagtcaagagacctacctcg
gttgatatgattgactgggtggacaacatgtggccacggcatcttaaagaaagtcagaga
gactccaccaatgccattatagacatgcagtaccctaaagtacagaagtattgtctgatg
agcgtcgagggatgcttcacagatttccacatagactttggaggcacatcagtctggtat
catatcctcaggggaagaaaggtgttctggctgatcccgcccacacctcagaacctggag
ctctatgagaactgggtgttgtcagggaaacagggtgacatctttctcggcgataaagcc
agtatgtgccaacggattgaactgaagcaaggctacacattcatgatcccttcaggtaca
catgctgtttacgtttaaattgaaactctggtgtttgggggaaactttctgcacagcttt
aacattcccatgcagctcaacatttacaacattgaggaccgcacacgggtgagcactcaa
acaagcactcgattattccattgttgcccatttgtgagctttttctgactgtctctgtgt
ttgtggtttgtagttcagttctataaagaggatgtgattaaacaaggaggctttaatggt
caagaagaaaatgtagtgaaggacgaggaggaggagatggtgaaggaggagccagagccg
gaggaagaggcagcatctcctgctcgtccaggggtgaaagttcacctgacaccctttgag
ctgcaagggctttgggaattactgcacaagttggaggaattgccagcacacaagaaatgc
gtcccatcaggcatcagaaatgccccagcattactcagtgacatacggaagctgctagag
gaacatgccaatgataaccccaaattgtcttacactggaaaaccaattgtcaaatggccc
aaaaggccctcgtggtatcagccgccgccgcctctgtctctgctgtaccgcccgcgcgct
cccggttcagcccccgtgttgccgcccgttcctcgacccgtgaagccgtcttcctccatc
tcggctctgagacgcaggcgtgtgcgctgcaagcgctgcgaggcctgtctgcgcaccgag
tgtggcgactgcaactactgtagggacatgaggaagtttggaggaccaggcagactcaag
aagagctgtgttctccgtcagtgtcttgcaccggcgctacctcttactgcagtgtgtgcc
atatgtaaggaaggctatcaggagtctgtagactccgagtccgtccaaacgctcatggaa
tgctccgaatgcgctcagatcactcatccagaatgtataaaggtgcccggtgagggtatt
attaataaggacctgcccagttgttgggaatgtccaaaatgtgtccagggcaagaaaata
gagtcttccagtagtagtgaggaggacacagacagcagtgtgtccaacggcagtcgcttg
tctggtcctccggctaagcgagcatacagagaagggattggggtggggggtctgcgtata
ggacgcagaggccgcccacccctctccttctcttcgctgcctctgacccgctccagacgg
cagccgcctccttcccagagactcctgctgcagcaccagcagaacaggaggagagcagga
gcactggagttacagctcaggaaaaggataaaattagaaaggaacaaaatcatccagtcg
acccgttcgtctgtctctctttctccaaagctcctgcgtcagcggagtctggagagaggg
ggggtagtcagagcgggacccggacggagcatttcgcgtggccgagggatgtcctcctgt
cgtgggagaggggtacgactccggggcggaggccgagggggaggcctgagagaaagaatg
gagatggaggtcgaaagagatgactctgtggaagaagaacaggaggagaggaaagagaac
ggacagtataatggtaaagagaaccgtcctcagagaccagggggtaaagctggtgaagac
gagaacggagaaagccatcgaaacggagagagcgagggaagcagtgagggaggagaggcc
actccatctgacacttctgtggtgctaagtgatgatgtcagaggccaggggtcctgcgtc
acggtgacgttacagccatcgaggggtaggcgcgaccctagcgccattgttcccaaactg
gaagccaacttgtcttctagaagccttccacaaaaccacaaagccctgctccgtccccca
ctgcgaaacggcgcccctcgctcagacggtcctcattcacctgcggacagattgcacgta
aacaaatcacatgctcttttgtcatcaccacacactctgaccagaagcgcatccaaacac
tcacacatggtgcggagtctgagatcaaacttcagagattcccctcaccggctgactcga
gagagaattgggaaaaaggctcgatcggaaaaggcgaagtcctcagactcttgtcccagt
tccaccttgcggccctcagcggagcagaacggagggaacgagcccggctgggagagagag
gtttgggtgtccgtgttccgctacttgactcgtgcagagctgtgcgtttgcatggctgtt
tgtaagagttggtacaaatggggctgtgacaagcgtttatggacgcggatcagtctgagc
cgctgccgctctataagtcctcaggccctcacgggcatcattaaacgccagcctgtcact
ctggacctctcctcggccaacatctccaagaagcagctcagctggctcatcaaccgcctg
ccaggccttaaggatctggtgctatcagggtgtaattgggcatcagtctctgcactgagc
tctccaagctgtcctttactgcgctctttagaccttagctgggctgatggtgtcaaagat
gcacaaatcagggagctgctgaacccaccaggcagcgacaaccgttcccagatgaagaac
atgcagtgcttgtggctgtgcggtctggaggtgaccgaagccacgctgaggctgatcatc
agacacatgcctctgctcactcgtctggagctctcgcattgtcccatcacagatggtgct
ctcaacctcctcagcgccgtgggctcctccacgcgcaacacactcacacacctcaactta
gcaggttgcagccgcctgacagaccggtgtctggtgtacctgcggcgcttgtcctgtctc
tccgtactggacctacgcgactgcaaaggggtctcgcgacaggcgtgcgaaagctttatc
tccgagctgtctgtcaatgccctctactgcctatcagatgacaagctcatccagaggata
tcgtaa
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integrated database retrieval system
