Cyprinus carpio (common carp): 109071813
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Entry
109071813 CDS
T05134
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109071813 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109071813 (smcr8b)
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
109071813 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
DUF4597
Motif
Other DBs
NCBI-GeneID:
109071813
NCBI-ProteinID:
XP_018943720
Ensembl:
ENSCCRG00000013836
UniProt:
A0A9Q9V6G7
LinkDB
All DBs
Position
B1:complement(19444491..19449728)
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AA seq
997 aa
AA seq
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MISSPDLVAFTKETDFCEVVKDPSVLPEELAVPLYPYTGDTTPWSKTSGANFTKDFILLS
EFSEQVGPQPLLTVPSETKACGTFDLNHFSLRIMSVDYQTSLTGPGGCGSLKLNFVEDSK
VVLGDSREGAFAYVHHLTLYDLEARGFVRPFCLAYVSSDENKIIQQFQQLSAEFSKVSEC
LKTGNRKNFANELETKLRDLEYTRVMLHREIERELNNASVMCANERERMLNGIPTLDVKL
KEKSLSHKDEMKLQGKGRCEISRKAEVECEKGNRSCITYDRDEQFGGRSKNKQDKGSCPT
PLANKGDELASVEKSIQEYKSLLKQVTCYRTRKLRDSEYSPYEPDDLPHSFEFDLDDLKH
GQLAGPVLECNVFPCTDTPSHSLKPIKNISSCRFDKRLKTLEELCDDYFHQQALQQLNSI
EKTFRGDACHLYSQQLCRNLLHNLKSTNFLFEDPCDLEEEVGLQIGIAGQHSVQQPSFLP
APSILSEPVSLESYVSCVEMVPIKLELGGSSQSPAVPSSVNTPAEDNRPLTSSAGETEME
NGGVVSASDCQENVEMCVSALMKTSISSGDSIEVLGTEKSFRSQGSNILMDTALLRPPPL
STTAMLEGPRQGRVTTIRTCSEDSIEVLCTTESILPEDLRASYPCAIDEESPEQETDEKD
ISHNQEDKQVKCVYGEGNEVPGGACMEELQDFYPAVILTPPDCPMTMTLSRSSSQDVCHA
SELIPLSLLDEPYRIVPDDLSDCFSYRSTTASTTSEIFPTCLPRNKREGGTRRRRGRVGR
AALQFLRQFPFAVHAVFSVLCGRTLVVLGSEEAAVRRLVTALSVYMPHLSKYRDGIQPWT
STPLQLTDLLNWKLIGFNRMCCFTYTNMPHCLGHHSRYLSILDVDQKTLRCPVYSGTLLN
LLVEPRSHFKRGNTYFMFAQSVQSKLVSTAFLLTFSHGFHTPSRPRESTWTQCFHSEIHR
DDKKILNYLSELIKLHFMEVPPNVLRFSYTTNCIFKL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgattagttctccagacttggtggctttcactaaagaaacagatttctgtgaagtagtc
aaagacccatcagtacttccggaggaactggctgttcccttgtatccctacactggggac
accaccccatggtccaagacctctggagctaattttacaaaggactttatccttttatca
gagttttcggagcaagttgggccccagcctttgcttactgttccttctgaaaccaaggct
tgtgggacatttgatttgaaccacttctcccttcggatcatgtcagtggactatcagacc
tcgctcaccggcccgggaggttgtggctctttgaaactgaactttgtagaagactcaaag
gtagttttaggggattctagagaaggagcgtttgcgtatgtgcaccatcttacgctctac
gacctggaggctcgagggtttgtgcgacctttctgccttgcctatgtgtcgtctgatgag
aataaaatcatacagcaattccagcagctttccgcagagttctccaaagtctctgaatgt
ctaaaaacaggaaacaggaagaactttgcaaatgaactggagacaaaactgagagatttg
gagtatacaagagtcatgttacatagagaaatagaaagagagttaaataatgcatctgta
atgtgcgccaatgaaagggaacgcatgttaaatggtatacctacattagatgtgaaactg
aaagagaaatcactatctcataaagatgaaatgaaattacaagggaaaggcagatgtgag
atttcaagaaaggcagaagtagagtgtgaaaaagggaataggtcatgtataacgtatgac
agagatgaacaatttggaggaagaagcaagaacaagcaggataaaggatcttgcccaacg
ccattggctaacaaaggtgatgaactggccagtgtagaaaaatccattcaggaatacaaa
agccttctaaaacaggtcacttgctaccgaactaggaagcttagagactctgaatattct
ccttatgaaccggatgaccttcctcattctttcgagtttgacctggatgatttaaagcac
ggtcagcttgctgggccagtgctagaatgtaatgtttttccttgcacggacacaccctcg
cattctctgaagccgattaaaaacatttcatcttgccgatttgacaagcgtctgaaaact
ctcgaggagttgtgtgatgactacttccaccaacaggctctacagcaactgaactccatt
gagaagacattcagaggagacgcctgccatctctactcacagcaactttgccgcaatctt
ctccacaacctcaaatctaccaatttcttatttgaggatccatgtgacttggaagaggaa
gtggggttacagattggaatagctggtcaacattcagtccaacaaccctcgtttcttcct
gcaccatcaattctaagtgaacctgtcagtcttgagtcatatgtctcctgcgttgaaatg
gtgccaatcaaactagagctgggtggatctagccaatctccggctgtacccagctctgta
aataccccggccgaggataaccgacccctaacatcctctgcaggggagactgaaatggaa
aatgggggagtagtttcagcttcagattgccaagaaaatgtggaaatgtgcgtttcagct
ttgatgaagaccagtattagtagtggagatagtattgaggtcttagggacagagaagtcc
ttcagatcccagggttcaaatatactaatggatacagcactgcttagacctccacctttg
tccactacagccatgctggaaggtccaaggcaagggagagtaactaccatacgaacttgc
agtgaagacagcattgaggttctttgcacaacggaatcaatcctaccagaagacctgcgt
gcttcatacccttgtgcaattgatgaggaaagtccagagcaagagactgatgagaaagac
atatctcacaaccaagaggacaaacaagttaagtgtgtttacggtgagggaaatgaagtc
cctggaggcgcctgtatggaggagctgcaagatttttatcctgcggtcatcttaacccca
cctgactgtcctatgactatgacccttagtcggtcaagctcccaagatgtttgtcatgca
tcagaattaatccctctctcattgttagatgagccctaccggatagtacctgatgatttg
tcagactgcttcagctatcggagcaccactgcctctacaacctctgaaattttccctact
tgtcttccaaggaataaaagagaaggtgggaccagacggagacgtggcagagtagggcga
gcagcattgcagttcttgcgacagtttccctttgcagtgcatgcagtgtttagcgttctg
tgtggccgaactttagtagtactaggcagcgaggaggctgcagtgagacggctggttaca
gcactgtctgtgtacatgccacatctgagtaaatacagagatggtattcagccttggact
tcaacgccgctgcagctaactgacctgctcaactggaaacttatcggctttaacaggatg
tgctgttttacttacacaaatatgcctcactgcctgggccatcacagccgatacctcagc
attctagatgtggatcaaaagacactgcgctgcccagtctacagtggtactcttctcaac
ctgctggtggaaccaaggagccactttaaacgtggaaacacctacttcatgtttgctcaa
agtgtgcaaagcaagcttgtctccacagcattccttttgacattttcacatggtttccat
acgcccagcaggcctcgggaaagtacatggacacaatgttttcattctgaaattcacagg
gatgataagaaaatcttaaattatttatctgaactcatcaaactgcacttcatggaggtt
ccacctaatgtcctcagattcagctacaccacaaactgtattttcaaactgtga
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