Cyprinus carpio (common carp): 109072673
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Entry
109072673 CDS
T05134
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04060
Cytokine-cytokine receptor interaction
ccar04150
mTOR signaling pathway
ccar04210
Apoptosis
ccar04217
Necroptosis
ccar04350
TGF-beta signaling pathway
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04625
C-type lectin receptor signaling pathway
ccar04920
Adipocytokine signaling pathway
ccar05132
Salmonella infection
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109072673
04350 TGF-beta signaling pathway
109072673
04150 mTOR signaling pathway
109072673
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109072673
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109072673
04217 Necroptosis
109072673
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109072673
04621 NOD-like receptor signaling pathway
109072673
04622 RIG-I-like receptor signaling pathway
109072673
04625 C-type lectin receptor signaling pathway
109072673
09152 Endocrine system
04920 Adipocytokine signaling pathway
109072673
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109072673
09171 Infectious disease: bacterial
05132 Salmonella infection
109072673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109072673
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109072673
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Tumor necrosis fators
109072673
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Cytokines
109072673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Arm_4
Motif
Other DBs
NCBI-GeneID:
109072673
NCBI-ProteinID:
XP_018944444
Ensembl:
ENSCCRG00000038973
UniProt:
A0A9Q9V6L6
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All DBs
Position
A19:15745372..15748136
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AA seq
237 aa
AA seq
DB search
MMDLESQLLEEGGLLPLPQVMVSRRKSGSSKSGVWRVCGVLLAVALCAAAAVCFTLNKSQ
NNQEGGNALRLTLRDHLSKANVTSKAAIHLIGAYEPEVSTKTLDWKKNQDQAFTSGGLKL
VEREIIIPTDGIYFVYSQVSFHINCKTNMTEDHDLVHMSHTVLRYSDSYGGYMPLFSAIR
TACAKVSNSEDQWYNTIYLGAAFKLRAGDRLCTKTKEELLPSVETGDGKTFFGVFAL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcttgagagtcagcttcttgaagaaggaggattgctgcccttaccgcaggtg
atggtgtcgaggaggaagtccggctcgtcaaagtcaggcgtctggagggtgtgtggggtc
ctgctggctgtggccctgtgtgccgccgccgctgtctgcttcacgctcaacaagtctcag
aacaatcaggaaggcggaaatgcgctgaggctcacattaagagatcatctttcaaaagca
aatgtcacttccaaggcagccatccatttaataggtgcatatgaacctgaagtgtctaca
aaaaccctggactggaaaaagaaccaggaccaggctttcacttcaggcggcttgaaatta
gtggaaagggagatcatcattcctactgacggcatttacttcgtctacagccaggtgtct
ttccacatcaactgcaagactaacatgactgaggaccacgatcttgtgcatatgagccac
actgtgttgcgctactccgattcctatggcggctacatgccactttttagcgcaatccgc
accgcgtgcgcgaaggtgtcaaacagtgaggatcagtggtacaacacgatttatctcggc
gcggccttcaagctgcgagctggagacaggctgtgcaccaaaacgaaggaagaactcctg
ccgagcgtagaaaccggtgacggaaagaccttctttggggtgtttgctttatga
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