Cyprinus carpio (common carp): 109074019
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Entry
109074019 CDS
T05134
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109074019
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109074019
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
109074019
NCBI-ProteinID:
XP_042626617
UniProt:
A0A9R0B949
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Position
A14:11217023..11251700
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AA seq
922 aa
AA seq
DB search
MSMKGRGSKYQKRVSFSEDEDEQCWKEENGGVDAHHLKSVSTVSDSSGYNRYNMKSSDTF
PHRRMTLPREKGRRQAIRGPAFMFNARGSSLTAEEERFLDAAEYGNIPVVRKMLEESPTL
NVNCVDYMGQNGLQLAVGNEHLEVTELLLRRDNLARVGDALLLAISKGYVRIVEALLGHP
SFAGGERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIE
RPHDYFCKCADCTEKQRKDSFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELVK
LANIEKEFKDKKNRNKETSQHNGFFLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGD
ISTELEEGRHHRSLLSRVKLAIKYEVKKFVAHPNCQQQLLKIWYENLSGLREQTTAVKCL
VVLVVALGLPLLAVGYWFAPCSRLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGI
TTLPNVTVTDYPLQIFRVKTTQFTWTEILIMIWVAGMMWSECKELWTEGPREYVMQLWNV
LDFGMLSIFIAAFTARFFAFLQAMKAQKYVDEKIHAPDLSLVTLPPDIKYFTYARDKWLP
SDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAF
MIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLF
GIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIIP
SPKSFYLCIKRLINLLRCRRHRLKKDVELGMDNSKSMLNLFTQSSLRMLDSHSFNSILNQ
PTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEEKSQATEELSL
LIQQLSDKLNPRPVHPHRANEG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaggcagaggatccaaataccagaaaagagtgtcgttttctgaggatgaa
gatgagcagtgctggaaagaggagaacggcggtgtggacgcacatcacctgaaatccgtc
agtacggtcagcgattcatcgggttataaccggtacaacatgaaatcttcggatactttc
ccccatcgcaggatgaccctaccacgagaaaagggccgacgacaggcgattcgcggaccg
gcgttcatgttcaacgcccgtggcagcagcctcacagcagaagaagaacgctttttggac
gcggcggagtacggcaatatcccggtggtccggaaaatgctggaagaatcacccacgctc
aatgtgaactgcgtcgactacatgggacagaacgggctacagctggccgttggcaacgaa
cacctggaagtcaccgagctgctcctgcggagagacaacctggcccgtgtcggggatgcg
ctcctgctggcgatttctaaaggttacgtgcgtattgtagaggccctgctgggacatccg
tcttttgcgggcggcgaacgactcacccgcagcccctgcgagctgcaagacgacgacttt
tactcgtacgacgaggacggcacacggttctcgcccgatatcacgcctatcatcctggcc
gcccactgccagaaatacgaggtcgtgcacatgctgctgatgaagggcgccaggatcgag
cggccgcacgactacttctgcaaatgcgctgactgcacggagaagcagaggaaggactcg
ttcagccactcgcggtccaggataaatgcgtatcgtggactggccagtccggcatatctc
tctctgtccagcgaagaccccgtactgaccgcactggagctgagcaatgagctcgtcaaa
ctcgccaacatcgaaaaagagtttaaggataaaaagaaccgtaataaagagacatcgcag
cacaatggcttctttctgaatgactacaggaagctgtctatgcagtgtaaagactttgtg
gttggcgttttggatctgtgcagggacacggaggaggtggaggccatcttgaatggagat
atatccaccgagctcgaggaaggccggcatcatcgctccctgctcagtcgagtcaaactg
gccattaaatacgaggttaagaagtttgtggctcatccaaactgtcagcagcagttgctg
aagatctggtatgagaatctgtctggtcttcgggagcaaaccacagcagtcaagtgtctg
gtggttttggtggtggcgctgggactccctctgctagctgtggggtattggtttgccccg
tgcagtaggcttggtaaaatactacgcagtccttttatgaagtttgttgctcatgcggcc
tcctttatcatcttcctgtgtctgctggtgttcaatgcatccgatcggtttgaaggcatc
accacccttcccaacgtcaccgtcactgactacccgctccagatcttcagagtcaagacc
acacaattcacctggacagaaatactaatcatgatctgggtagcaggaatgatgtggtcg
gagtgtaaggagctctggacggagggtccgagggaatatgtcatgcagctctggaatgtg
ctggatttcgggatgctgtccatcttcattgcagcattcaccgcccgttttttcgccttc
ctgcaggccatgaaagcccagaagtatgtggatgagaagatccatgctccagacctctca
ctggtcacgctgccgccggacatcaaatatttcacatacgcgagagataagtggcttcca
tcggatcctcagctgatctcggagggtctgtacgccatcgctgtggttctgagcttctct
cgcatcgcctacatcctgccggccaacgagagcttcggcccgctgcagatctcactggga
cgaacagtgaaggacatcttcaagttcatggtcctcttcatcatggtcttcctcgcgttc
atgattggcatgttcatcctctactcctactacctgggggcaaaggttaaccctgccttc
accacggttgaggaaagctttaaaactctcttttggtccatattcgggctgtctgaggtg
tcttctgtggtgttgaaatatgatcataaatttatcgaaaacattggctacgtgctgttt
gggatctataatgttaccatggtggtggttctgctcaacatgcttattgccatgataaac
agctcataccaggaaatagaggatgatgcagatgtggaatggaagttcgctcggtctaaa
ctttggctctcgtattttgacaatggcaagactctcccgcctccattcagcatcatcccc
agtccgaagtccttctatctgtgtatcaagagactgatcaacctgctccggtgtcgccgg
caccgcctgaaaaaagacgtggagctgggcatggacaactcgaagtccatgctgaacctc
ttcacccagtcgagcctgaggatgctggactctcacagcttcaacagcatcctaaatcaa
cccacacgttatcagcaaattatgaagcgtctcatcaaacgctatgtactgaaagcacaa
gtggacaaagaaaatgatgaagtgaatgaaggtgagctgaaggagatcaagcaggatatt
tccagtctgcgatatgaactgctagaggagaaatctcaggccacagaagagctctcactc
ctcatacagcaactcagtgacaaactcaacccgcgacctgtccatccgcaccgagccaat
gaagggtga
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