Cyprinus carpio (common carp): 109074456
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Entry
109074456 CDS
T05134
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109074456
Membrane trafficking [BR:
ccar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109074456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
109074456
NCBI-ProteinID:
XP_042598835
Ensembl:
ENSCCRG00000045682
UniProt:
A0A9Q9XBY3
LinkDB
All DBs
Position
B17:complement(24350173..24392142)
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AA seq
1778 aa
AA seq
DB search
MKRSKHRASKDDGKGQDEPAILETEDMRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEP
SAGRPVDFQVSVTVIEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVFDFH
VPPDVMFDKILKVSVIHSKNLLRSGTLVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDIT
AGCKGYVKCDIAVVAKGDTIKTPHKANETDEDDIEGNLLLPEDVPAERQWARFYVKIYRA
EGLPKMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQKGKTSIQKSSYEPIWNEQIVFTE
QFPPLCRRMKVQIRDSDKVNDVAIGTHFIDLQKIANDGDKGFLPTLGPAWANMYGSTRSY
TLMDEYQDLNEGLGEGVSFRARLLISLSVEILDTSSPEVMSSTEVQVEGIPNISDNATGK
IEEFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSEVDTPTKPKTKKKKGGDGDDEESE
LIHGSSDEEVDDGGDMTSVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLY
NANIMDRIADKLEDGLNDVQEIIKTEKAYPERRLRGALEELSNGCSTFVTLANNDQNQAG
KTKLDRERLKLCMQELENIGQQAKNMRSQVKKSNVKDKIKLAQNFLHKLRFLSDEPQHSV
PDIYIWMISNNKRIAYARVPSKDILFSSVDEETGKDCGKVQTIFFKLPGKKSFGPAGWTV
QAKTELYLWLGLNRQRKDYLSGLPNGFEENKAVKGPGIHSSPPISLMYTMKQIFQLRVHM
YQARSLFAADSTGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLLVFDNVELYGEAGELR
DDPPIIVIEIYDQDTVGKADFMGRTFAKPITKMSDEHYGPPRFPPQLEYYQIYRGNGTAG
EMLAAFELLQIGPAGKADLPQIDGPSDFDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLK
RVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRV
VDCRAFGRYTLVGSNAVTSLRKFIYRPSDKSVSNWSDMEEVVIHTEPEPAVKKTETVVKL
DSASDAVVKVEMPDDEKGGKGKKKRKKGEEVEEEELDESMLDWWSKYFAYIKTTKKILKA
QEAEAEEKEDFDSGEGTKKKRGKGNKNKAMPGPGVPEKKKQKIEELKMYNRELEYEFDTF
EGWLHTFNLYRGKCSDDADVEQNAADEDRLIGKFKGSLCIYKVPASDDVSREMGFDSNMG
MFQNIPHNDPINVLVRVYVVRATELHPADINGKADPYIAIKLGKTEIKDKENYISKQLNP
VFGKSFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRFYSKHRATCGLSTSYS
IHGYNVWRDPMKPTQILAKLCKDGKMDPPQYGPGGRVKVANRVYTGPTEIEDENGLKKQT
DEHLALAVLNRWDDMPRIGCKLVPEHVETRSLLNPDKPGMEQGRIELWVDMFPKDMPAPG
PAIDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVH
YHSLTGEGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFS
ADDFLGAIELDLNRFPRGAKTAKQCSIDMVINEQDMPMVNIFKQKRIKGWWPFVARDEND
ELEITGKVEAELQLLTGEEAEKSPVGEGRNEPDPLEKPNRPDTTFLWFLSPLKAIRHLIC
NQYKWLVIKIVLALMLLAIIALFLYSMPGYMAKKLLGV
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtagcaagcatcgagcctccaaggatgatggcaaaggtcaagatgagccggcc
attctggagacggaggatatgaggatgccagaccctgacaccatctcactcgcatcagtc
actgccgtcacaaccaatgtctccaataaaagatcaaagcctgacatcaagattgagcct
agtgctggaagaccagtggatttccaagtcagtgtcactgttatagaggccagacagctg
gtgggtctgaacatggatccagtggtgtgtgtagaaattggtgatgaaaaaaaatacacc
tcaatgaaggagtcgaccaactgcccttactacaatgagtacttcgtttttgacttccac
gttcctcctgatgtcatgtttgacaagatcctgaaagtgtctgttatccactctaaaaat
cttttgcgaagtggcacgctggtcggaagctttaagcttgacgtgggcacagtttataca
caacctgaacatcagttcttccacaaatgggccactttatgtgaccccgatgatatcact
gctggatgcaaaggctatgtcaagtgtgacatcgcagttgtggcaaagggcgacactatc
aaaactccacacaaagcaaatgaaacagatgaggatgacattgaggggaatcttctgttg
ccggaagatgtcccggctgagcgtcaatgggcaagattctatgtgaaaatctacagagcc
gaggggttgcccaaaatgaacaccagcataatggcaaatgtcaaaaaagctttcattgga
gaaaataaggacttggttgatccatatgtccaagtgcaatttgcagggcagaagggtaaa
acttcaattcagaagagcagctatgagccgatctggaatgagcagatcgttttcactgag
cagtttccaccactgtgccggagaatgaaagtccagatccgtgattcggataaagtgaac
gatgtagccattggaacgcacttcattgacctgcagaagattgctaatgatggagacaaa
ggctttcttccaactctcgggccggcttgggccaacatgtacggctccacacgcagctac
acgctcatggacgagtaccaggacctgaatgaaggactaggggaaggggtgtctttcagg
gcccgactgctgatcagtctgtccgtggagatactggacacctcctctcctgaagtaatg
agctccactgaggtgcaggtggaggggatacccaacatctcagataatgccacggggaaa
attgaagagttctttctctttggatgtttccttgaagccactatgattgacaggaagatt
ggagacaaacccatcaactttgaggttacaataggaaactacggcagtgaagtcgatacc
ccaactaagccaaaaacaaagaagaagaagggtggcgatggagatgatgaggagtctgag
ctcattcatggctccagtgacgaggaggtggatgatggtggagatatgacatcagtttcc
accactcctccaatgaagccagtcatcactgacagaaactatttccacctcccgtatttt
gagaggaagccctgcatctatatcaagagctggtggcaggaccaaagacgacgactttat
aatgctaacatcatggacagaattgcagataaattggaagatgggttgaatgatgtgcaa
gagatcattaaaacagagaaagcctatcctgagcgcagactcagaggagccctggaggaa
ctcagcaatggctgcagtacctttgtaactttggcaaacaatgatcagaatcaggctggg
aagactaaactggaccgggagagactgaaattatgcatgcaggaattggaaaacattggc
cagcaagcaaagaatatgcgatcccaagtaaagaaaagcaatgtgaaagacaaaataaaa
ctggcacaaaacttcctccacaagctaagattcttgtctgatgagcctcagcatagtgtt
ccagatatttacatatggatgataagcaacaacaaacggattgcatatgcccgtgttccc
tccaaagacatcctcttctcttctgtggatgaagaaactggaaaggactgtgggaaagtc
cagaccatctttttcaagctccctggtaagaaaagctttggacctgcaggctggaccgtt
caggctaaaactgagctgtatctgtggctcggcttgaacaggcagcgtaaggactacttg
agcggcctaccaaatggttttgaagagaacaaggcagtaaaagggcctggcatacattct
tcaccccctataagcctgatgtacacaatgaagcagatcttccagctgagggttcacatg
tatcaggcgcgcagtctgtttgcggctgacagcacaggcctgtcagacccttttgccagg
gtatttttttccacacacagccaggtcacagaggtcctgaatgagacgttgtgtcctaca
tgggatcagctgctggtgtttgataatgtggagctctatggtgaggctggtgaactgaga
gatgatcctcctataatcgtcatcgagatctatgatcaggacactgtcggaaaagctgat
ttcatgggtagaacatttgcaaaacctataaccaagatgtcagacgagcattatgggcca
cctcgcttccctcctcaactggagtattaccagatctaccgaggaaacggcactgcagga
gaaatgctggcagcctttgaactgctgcagattggaccagctggaaaggccgacctgccc
caaatagatggaccttccgatttcgatcgtggtccaatcctgcctgttcctattgggata
agacctgtcttgagtaaataccgaattgaggtacttttctggggcctgagggacctgaag
cgagtgaatctggctcaagttgaccgtccccgtgtggacatcgagtgtgcagggaaaggt
gttcagtcagcgctgattcagaactacaagaaaaaccccaacttcagcactctggtgaag
tggtttgaagtggacctgccagaaaacgagctcctccacccccctctgaacatccgtgtg
gtggactgccgggcatttggtcgttacacgctagttggctctaatgccgtcacatctcta
cgcaagttcatttacaggccatcggacaagagtgtcagtaactggtctgacatggaggag
gttgtgatccacacagagccagaaccagctgtgaagaagactgagacagtggtcaaactc
gactcagcatctgatgctgtggttaaggttgaaatgccagatgatgagaaaggtgggaaa
gggaaaaagaagcggaagaagggcgaagaggtggaagaggaggagctggatgaaagcatg
ctggactggtggtccaaatactttgcctatattaaaacaaccaaaaagatccttaaagca
caagaggcagaagctgaagaaaaggaagattttgactctggagaggggaccaagaaaaag
agaggaaaaggaaacaagaacaaagccatgcctgggccaggagtaccagagaagaagaag
cagaaaattgaagagctgaagatgtacaacagagagcttgaatatgagtttgacaccttt
gaaggttggcttcacactttcaacctttatcgaggcaagtgttcagatgatgctgacgtt
gagcagaatgcagctgatgaagacagacttattggcaaatttaagggatccctgtgcatc
tacaaagtcccagcatcggatgacgtgtctagagaaatgggctttgattctaacatgggc
atgttccagaacatcccacacaacgaccccattaacgtcctcgtccgagtctatgtggtc
cgggcaacagagctgcatcctgcagacatcaatgggaaggccgacccatatatcgccatc
aagctcgggaagactgagatcaaggacaaagagaactacatctctaaacaactcaaccct
gtgtttggaaagtcttttgatattgaagcgacgctcccaatggattccaccctcaccgtg
tccatctacgactgggatttggtgggaaccgatgacctgattggggagacaaagattgac
ttggagaaccgtttctacagcaagcacagggcaacatgtggtctcagcaccagctactca
attcacggctataatgtgtggagggacccaatgaagccaacgcaaatccttgccaaactc
tgcaaagatggaaaaatggatccgccccagtacggcccagggggacgagtgaaagtggcg
aacagagtttacacaggaccgactgaaattgaggatgaaaatggactgaagaaacagacg
gatgagcacctggctcttgctgtactaaaccgctgggatgatatgccacggatcggctgc
aaactcgtcccagagcacgtggagacaaggtccctcctgaatccagataaacctgggatg
gagcaggggaggattgagttgtgggtggacatgttcccaaaggatatgcctgcgcctgga
cccgctatcgatatttcaccaaggaagccaaagaaatttgagctcagggtgatcgtgtgg
aacacggatgaagtcgttctggaggacgatgacattttcacaggggaaaaatccagtgac
atatttgttagaggatggctgaaaggccaacaagaagacaagcaggacacagatgtccac
tatcactctctgaccggagagggcaatttcaactggcgcttcatttacccttttgactac
ctacaggccgaagagaaaattgtcatctcaaagaaagagtccatgttttcttgggacgag
actgagtataaaattcctgcccgactgaatttgcaagtgtgggatgcggatcacttctct
gcagacgacttcttgggtgcaattgaactagacctgaatcgatttcctcgtggtgcaaag
acagcgaagcagtgctccattgacatggtgattaacgagcaagacatgcccatggtcaac
atcttcaaacagaagagaattaaaggctggtggccatttgtggcccgagatgaaaacgat
gagttggaaattacagggaaagtagaagcagagcttcagctgctgaccggtgaggaggcc
gagaagagtcctgttggtgaaggacgcaatgaaccagaccccttggagaaacccaaccgc
cccgacactacattcctgtggttccttagcccactaaaggcaatccgtcatctcatctgc
aaccagtacaagtggctggtcatcaaaattgtgttggcgctgatgcttctggccatcatt
gccctgttcctctacagtatgcctggctatatggccaagaaactcctgggggtctga
DBGET
integrated database retrieval system