Cyprinus carpio (common carp): 109077293
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Entry
109077293 CDS
T05134
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04020
Calcium signaling pathway
ccar04510
Focal adhesion
ccar04518
Integrin signaling
ccar04540
Gap junction
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109077293 (pdgfab)
04020 Calcium signaling pathway
109077293 (pdgfab)
09133 Signaling molecules and interaction
04518 Integrin signaling
109077293 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109077293 (pdgfab)
04540 Gap junction
109077293 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
109077293 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109077293 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109077293 (pdgfab)
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Growth factors (RTK binding)
109077293 (pdgfab)
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Growth factors/receptors
109077293 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
109077293
NCBI-ProteinID:
XP_042574019
Ensembl:
ENSCCRG00000023949
ENSCCRG00000041183
UniProt:
A0A9Q9VZF4
LinkDB
All DBs
Position
A3:complement(11053555..11070075)
Genome browser
AA seq
229 aa
AA seq
DB search
MRTLFCCFLLLTSHLLLASAEEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGPGNEVI
EEVKQKHHQKSHHSFKAASSDLKSLQLSHRRKRSVVEEAVPAMCKTRTVIYEIPRSQVDP
TAANFLIWPPCVEVKRCTGCCNTGNMCCHPSKKQHRTVKVAKVEFASRKKAKLKEVLVRL
EDHLECVCTSQHHVIEHAEADTGPRKVKNGKKRKHRKQAVAAQINKDIQ
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttattctgctgctttctgctcctcacctcgcaccttctgctggcatctgct
gaggagtttgcaatccctcaagatttcatcgacagactgtcgcacagcgaaatcaacagc
atcagcgacctccagcggctactggaggtaaattccccaggtcctggaaatgaggtgatt
gaggaggtcaaacagaagcaccatcagaagagccatcactcattcaaggccgcttcctca
gatctcaagagtctgcagctgtcccacagacggaagaggagtgtcgtagaggaagcggtg
cccgctatgtgcaagacacggacagtgatctacgagatcccccgcagtcaagtggatccc
accgctgcaaacttcctaatatggcctccgtgtgtggaggtgaaacgctgtacaggctgc
tgcaacaccggcaacatgtgctgtcacccctccaaaaaacagcaccgtactgtcaaggtg
gcgaaggtagagtttgcatcgcgtaagaaagcaaaattgaaggaggtgcttgtccggtta
gaggatcatttggaatgcgtgtgcacgtcacagcatcacgtgatcgagcacgcggaagca
gacacaggcccacgcaaagttaaaaatggtaaaaaacggaaacacagaaagcaagcagtg
gcagcacagatcaacaaggatattcaataa
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integrated database retrieval system
