Cyprinus carpio (common carp): 109080673
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Entry
109080673 CDS
T05134
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04517
IgSF CAM signaling
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109080673
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109080673
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109080673
NCBI-ProteinID:
XP_042603446
Ensembl:
ENSCCRG00000032018
LinkDB
All DBs
Position
B21:18479792..18565897
Genome browser
AA seq
1586 aa
AA seq
DB search
MEFLFPEIREFNMNSSVDLSLKKALRTPPTRRTAEDLNTIYTHLFHMDVLCHLREHQLRS
MCMTARYERYEANHVLFYADSISTCWFVLLSGSVLVKEHMYLARCCFGTQRGGRRGCECI
TLEPSEMIVVENASESDGAALQGNSRRRFHKVNAGGERQLIVDATLPGDLSKMHLTDHAH
QQMHMPPSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAPVDSEEEEEDEDIEH
SSEALLGRDLVRECLEKDAVDRTDDDIEQLLEFMHQLPAFANMTLSVRRELCRVMMFEVV
EQEGTIILQDKQELDLWYVILNGSVEISYGDGRTEILCMGNSFGISPSLDRQFMNGVVCT
KGDDCQFVCIAQEDYCRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIKGTP
ERLIMHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFRVDSLRDTVTRIVLLW
VNNHFNDFEGDPVMTQFLEDFEKLLDSSKMKGHLRLLNIACAAKAKCRQITLQKPSRESP
LFFTVQGGSERGFGIFVETVEEASRAAEAGLKRGDQIMEINGQNFENISYSKAMDILKNN
THLSLTVKTNIFVFKELQSRVRNEKKNGGPHVPKIQERKSNRFSIPDLPGDLEFPSDSKS
RKKLKANTVSGGRNKIRKMLEKTRFSILPPKPFSDSGMSQSQDDSIVGTKQCRHSVAIMP
IPGSLQYTSPELFAAQPQISRLTKPTDIPDQVIRVFKADQQSCYIIISKDTTAKDVVSHV
VSEFNLIAAAETYSLCEVSVSPEGVTKQRRLPDQLSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELLRESQISLLQLSTMEVAAQLSMRDFGLFRNIESTEYVDNLFKLDPGGGGSSH
LKQFEAVINQETFWVATEILREPNALKRMKTIKHFIKIALHCRECKNFNSMFAIISGLNL
APVARLKSTWEKLPSKYEKLLRDLQDIFDPSRNMAKYRNTLSSQSVQPPIIPLFPMVKKD
LTFLHEGNDSSVDGLVNFEKLRMIAKEIRNVVRMTSANMDPALMFRQRKKRWKSLGSLSQ
GSTNSNLLDVQGNHKKRVRRSSLLNAKKLYEDAQMARKVKQYLAHLEVETDEEKFQIMSL
QCEAAYSTLSKNLSERRSTKSDMSPVSMRSGVSSAKSQNRVSQVLQVPPVSLYPLRKKSI
AKDLSASFGPNSPQMLKKAAGAADDMNLKRPEDTASVSSLHSSPTVSPQGSPRKVGGAPR
QNCGQLNLSGSSSSLASEVGVRTAGGRSYGIGYALLPTGRSDLSDSSEISSRSSIVSNGS
VDSMLTAPTISVPSETPTNAPADCSQPGMSSSSAQHLAVRETSFMFNSSAEELTVPEQTS
VSEMADSGRGSWTSCSSNSHDNLQTLPGQRALDLLNHRHTPMCGPIAEVETGPGLPEDSC
SRDGSELSQSRQSWTSSSSLSDTYEGSYGTVRRKTQDQQSTDASYKTITSSTEKGLIVYC
VTSPCKDDRFKAPPPTPPGYQGLTLGDAVQDGGVLRPAHVKPPEYSVALQRCKLRHSLAE
PSLSRPPSVTLHSHADSEEDEQVSAV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttattcccggaaatcagagagtttaatatgaattcctcagtggatttatcg
ctgaagaaagcgctgagaactcctccgacgcgacggactgctgaggacctgaacaccatc
tacactcatctgttccacatggatgtgctgtgtcacctcagagaacatcagctcaggtcc
atgtgcatgacggccaggtacgagcgctatgaggctaaccatgttctcttctatgctgac
agcatctccacgtgctggttcgtcctgctctcgggctcagtgctggtcaaggagcacatg
tatctggcgcgatgctgtttcgggacgcagcgtggaggaagacgaggctgtgaatgcatc
actttagagccgtctgagatgattgtggtggagaacgccagcgagagcgacggcgcggct
ctgcagggaaactcgcgccgccgcttccataaagtgaacgccggaggagagcggcagctg
atcgtagacgccacgcttcctggtgacctcagcaagatgcacctgacagaccacgcccac
cagcagatgcacatgccgcccagccaatcaggatgcagcatcgccagtgactcggggagc
agcagcctatcagacatctaccaggccaccgagagcgagatgggagacgtggatctgtcc
ggcctccccgaagctcctgtggactctgaggaagaggaggaggatgaagatatcgagcac
tcctcggaggctcttctgggcagagatctggtgcgagagtgtctggagaaggatgcggtg
gatcggaccgatgacgacatcgagcagctcctggagttcatgcatcagctgccggctttc
gctaacatgacgttgtctgtcaggagggagctgtgtcgggtcatgatgttcgaggtggtg
gaacaggaaggcaccatcattcttcaggacaagcaggagctggacctgtggtacgtgatc
ctgaatggttctgtagagatcagctatggagacggccgaacagagatcctgtgcatgggc
aacagcttcggaatctcaccgtctctagacagacagttcatgaacggcgttgtgtgcact
aaaggagatgactgccagtttgtgtgcatcgcacaagaggactactgccgcatcctcaac
catgtggagaagaacacacacaaggtggaggaggagggcgagatcgtcatggtgaaggag
caccgagagctggaccgcagcggcaccaggaagggccacatcgtcatcaagggcactcct
gagcgtctgatcatgcacctggtggaggagccgtcagtggtggatcccacttacattgag
gacttcctcctgacgtaccgcaccttcctgtccagccccatggaagtgggcaagaaactt
ctggaatggttcagagtggacagtctcagagacacggtgacgagaatcgtgttgttgtgg
gtaaacaatcattttaacgattttgagggcgatccggtcatgactcagttcctggaggac
ttcgagaagttactggactcctcgaaaatgaagggtcatctgcgtctgctgaacatcgcg
tgtgctgctaaagccaagtgtcgtcagatcaccctgcagaagccgtccagagagtctccg
ctgttcttcacggttcagggcggcagtgagcgcggcttcggcatcttcgtggagactgtg
gaggaggccagtagagcggcagaagcagggctcaagcgtggagatcagatcatggagatc
aatgggcagaactttgagaacatctcttactccaaagccatggatatcttgaagaacaac
acgcacctctctcttactgtgaagaccaacatcttcgtttttaaagagcttcagagccgt
gtgaggaatgagaagaagaacggtggtcctcacgtccctaagattcaggagaggaagagc
aaccgcttctccatcccggatctgcccggtgacttggagttcccctcggacagcaagagc
cgcaagaagctgaaggccaacacagtgtctggaggacgcaacaagatccgtaagatgttg
gagaagaccagattcagcatcctgcctccgaagcccttcagtgacagtggcatgtctcag
tctcaggacgacagtatcgtgggcactaagcagtgccggcacagcgtggccataatgccc
atccctggcagcctacaatacaccagtcctgaactatttgcagcccaaccacagatatct
cgacttaccaaaccaacagacattccagatcaggtgatccgcgtgttcaaggccgaccag
cagagctgctatatcatcatcagtaaagacaccacagccaaagatgtcgtctcgcatgtg
gtcagcgagttcaacctcatcgccgctgcagagacctactcgctgtgtgaggtgtccgtt
agtcctgaaggggtcaccaaacagcgccgactccccgaccagctctcaaaactagcggac
cgcatccagctcaacggcaggtactacctgaagaacaacatggagacagagacgctttgc
tctgatgaagacgctcaggagctcttgagggagagtcagatcagtctcctgcagcttagc
accatggaggtggctgcacagctctccatgagagacttcggcctgttccgtaacatcgag
tccaccgagtatgtggacaacctgtttaagctggaccccggcggtggaggcagcagccac
ctgaagcagtttgaggcagtcatcaaccaggagaccttctgggtggccactgagatcctg
cgcgagcccaacgcactcaaacgcatgaagaccatcaagcactttatcaagatcgccctg
cactgccgcgagtgcaagaacttcaactccatgtttgccatcatcagtggtcttaatctg
gctccagtagctcgcttgaagagcacgtgggagaaactacccagtaagtatgagaaactc
ttgcgtgaccttcaggacatcttcgacccgtctcgcaacatggccaaataccgcaacaca
ctgagcagccagagcgtacagcctcccatcatcccactgttccccatggtcaagaaagac
ctcaccttcctgcacgaaggtaacgactcgagtgttgacggcctggtgaatttcgaaaag
ttacgaatgatcgccaaggagatacgaaatgtggtgcgcatgacgtcagccaacatggac
ccagcgctcatgttcagacagaggaagaagaggtggaagagtttagggtctctgagtcag
ggcagcaccaactcaaacctgctggacgttcagggcaatcacaagaagcgcgtgcgccgc
agctctctgctcaacgccaagaagctgtacgaggacgcacagatggcacgtaaggtgaag
cagtacctggcacacctggaggtggagacggacgaggagaagttccagatcatgtcgctg
cagtgtgaagcggcctacagcacactgtctaagaacctgagcgagcggcggtccactaaa
tcagacatgtccccggtgtccatgcgctccggtgtgtcttcagccaagtctcagaaccgc
gtctcccaggtgctgcaggttcctcccgtcagcctttaccctctgcgcaagaagagcatc
gccaaagacctgtccgcttccttcggtcccaactcacctcagatgctgaagaaagcagct
ggagcggccgatgacatgaacctcaagagacccgaagacacggccagcgtctcgtctctg
cactccagtcctaccgtctccccacagggatctcctcgcaaagtgggcggagctcccaga
cagaactgcggtcagctgaacctgtcgggttcgtcctcgtctctggccagcgaggtcggt
gtcaggacggcagggggacgctcgtatggcataggttacgcactcttgcccaccggcagg
tccgacctgtccgactccagcgagatctcctcccgctccagcatcgtcagtaacggctct
gtggactccatgctcacagcacccaccatcagcgtcccgtcagagacgcccacaaacgct
ccagccgactgcagtcagcccggcatgagttcatcttcagctcaacaccttgccgtgagg
gagaccagcttcatgttcaacagcagcgcggaggagctgacggttcccgagcaaacctcc
gtctctgagatggccgacagcggccgcgggagctggacctcctgctctagtaactcccac
gacaacctccagactcttccaggccagcgagctctggacctgctcaaccatcgccacacg
cccatgtgcggcccgatcgccgaggtggagaccggcccgggtctgccagaggacagctgc
tccagagacggatctgagctcagtcagtccagacagagctggacgtcctccagttccctg
tcggacacctacgagggcagctacggcaccgtcagacgcaagacgcaagatcagcaaagc
acagacgcttcgtacaagaccatcacgtccagcacggagaagggactcatagtgtactgt
gtaacgtcaccctgcaaagacgataggttcaaagcgccgcccccgactccgccggggtac
cagggcctgacgctgggcgacgccgtgcaggacggaggagtcttgcggccggcccacgta
aagccgcccgagtatagcgtggccttgcagaggtgcaagctgcgacacagcctcgccgag
cccagcctgtccagaccgcccagtgttactctccattctcacgctgatagtgaggaggat
gagcaggtttctgctgtttga
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integrated database retrieval system
