Cyprinus carpio (common carp): 109084240
Help
Entry
109084240 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109084240
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
109084240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INT1_R3
INTS1_RP2B-bd
INTS1_R4
UNC45-central
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
109084240
NCBI-ProteinID:
XP_042576026
Ensembl:
ENSCCRG00000037296
UniProt:
A0A9Q9W445
LinkDB
All DBs
Position
B3:complement(18829510..18856876)
Genome browser
AA seq
2184 aa
AA seq
DB search
MNRPKPTRRPSHTKPSGHPPPGDFIALGAKGQSSEPKANPALLKPASTGLPPDRKREASS
SLPSTSSLSSLSKRPKHSSTPSSALSRLAEVAAVDKRSISPSIKEPSVVPVEVSPAVLLD
EIEAAEAEGNDDHIEGVLCGAVKQLKMNRAKPDMTLYLSLMFLAKIKPNVFATEGVIEAL
CSLLRRDASINFKAKGNNLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDSS
HCKTFVDNIQTAFTTKMPPKSMLLQTETGRSGGDLSAGNSPHPSTPDEDEGQTELLIAEE
KLSPEDDGQVMPRYEELAESVEEYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYKEVR
LMAVQRLEMWLQNPKLTRPAQDLLMSLFMNCNTHGSDDMEFISNLIKIRLKPKVLLSHYM
LCVRELLNAHRDNLGTTVKFVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVFQDL
LTNKDDYLRASRALLREIIKQTKHDTNFQSFCLGLMQERKEATYVDMEFKERFVIQVTDL
LTVSMMLGITAQVKEAGIAWDKGEKKNLEALRSFQNQIAAIQRDAVWWLHSVVPTISKVA
PKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLIRILVIGLSRD
LPLGPADAMELADHLVKRAAXVQSDDLEVLRVERIQLIDAVLNLCTYHHPENIQLPAGYQ
PPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLMEMVMTNNYSYPPCTVAD
EETKTEMINRELQISQKERQEILAFESHLAAASTKQTITENNSLLLSQLTCLDPKGPPRR
PPPHVLDQLKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSLDV
LPVQCLCEFLLHDAADDRSSAADEEEGESKKQRAKKRQRQQKQRQLLGRLQDLLLGPKAD
EQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGALKDEEERDQLMEEDSRDAELLP
GYQWLLQDLPKLPLFDSVRSLTSNALQQAIHMETDPQTISAYLIYLSQHAPVEEQSLHND
LALDVARLIMERSTIMNCLFSKHSCRPESDAVLSALIFIFSTYICHMRKTKDGEDLYSWS
ESQDQVFLRGTTGETATMHILVVHAVVILLTLGPPKGESEFYTLLDIWFPDKKPLPTAFL
VDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYL
DQAVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGHMFHSLLSASLPLRRDSSEVSRAK
VTVEAPHGSVKMRAVSQVPVIGPEDDLAGILLQLFPLKMDPRWPPPPVRPLSLALQQTLA
QEVLRTRQGHIQQGGAAGRLLQALAALLNSAHAGALVMAMHHSHTISCPLLRQLHLYQAH
NLRNTTTHNLFLAGPLHSLLKSLAAQYSHKHRVTYVRTGFLHLAEALPYRRDSEVAVRSI
IASLRAGEKCNAEPELIRKVLQGLMEVKSPYLEELLSLLMTIGTKTGTIGNTAGPVAMVI
SLLLQETEERGVKIEVDSKIAESKKPGSCSGLLVDWLELLDPEVTSVCSDLQQKLLFAQN
KLQNKCCEKDLIAKSGVSVAPSYRPYLLALLTHQSNWSTLHQCISSLLNKHRDQRLDPTS
ALDFLWACSHIPRIWQGRDQKTPQKRTEQFVLKLSSEELISLVDLILSESELSCRDSATS
KSALDQVSCSLLQSRLPLLHSCLNSDLDNVKKVSEYLISCVKKWGDSIMSKRCQTLLLQI
YLHFPEVIQHIRLPEATLSAEGAADGSTCKLDVLVHRLITLLADTGDSKSAENLASDANL
ACRKLAVSHPVLLLRHLPMIAALLHGRVHLNLQEIRQQNHLTFFSDVLFVLELLQPLVFH
SDHQRALQDCLLSFIKVLQNFKRSSRMPIINKFVQFIQKYITHDAASAVPFLQKHSDVLQ
GLSTENPDLVQLKSLLAGLTLPVKSGSSESAAEDRDAEDSSSSSLPLVNISASMPLTAAD
MTKCLKKISKGEAIEDVFEGLTEVDEKSKRNPEIIQYFVNDLQRLMSSPEEVCRNMAFTL
ALRCNQNIPSMAAEFLPTFMYCLGSGNFDVVQTALRNLPEYVLLCQEHADILLHEAFLVG
IYGQIDTSSMITESMKVLRMEAKT
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaaagccaacaaggcgacctagtcacaccaaaccatcaggtcacccacct
ccaggtgatttcattgctcttggagcgaagggtcagagcagtgagcccaaagcaaaccca
gctctcctgaagccagcgtccaccggtttgcccccagaccgcaagagagaggcgtcttca
tctctcccctctacctccagcctgtccagtctttccaaacggcccaagcattcttctact
ccatccagtgccctctcacgcctcgctgaggtggctgccgttgacaaaagatcaatatcc
ccctccatcaaagagccatctgtagttcctgttgaagtgtcacctgctgtgcttctggat
gagatcgaggcagcggaggcagagggtaatgatgaccacattgagggtgtgctctgcggg
gctgtcaaacaactgaagatgaaccgagccaagcctgacatgacgctctacctcagcctc
atgtttctcgccaaaatcaagcccaacgtctttgccacagagggtgtgatagaggctctc
tgcagtttgctccgccgtgatgcctcaatcaactttaaggccaaggggaacaacctggtg
tctgtgctggcctgtaatttactgatggctgcctatgaggaggatgagaactggcctgag
atatttgtcaaagtctacattgaggactctctcggtgagcgtatttgggtggacagctcg
cactgtaaaacttttgttgataacatccagactgccttcacaaccaagatgcctcccaag
agtatgctgctccagacggaaacagggcgatcagggggagacctcagtgcagggaacagc
cctcatccttccactccagatgaggatgaaggtcagactgagcttttaatcgctgaggag
aaattgagtccagaggatgatggacaggtcatgcccaggtacgaagagctggctgaaagt
gtggaagagtatgtcttggacgttttgagggaccagctgaaccgtcgccagcccatggat
aacgtgtccaggaaccttctgcgccttctcacggccacctgtggttataaagaggtccga
ctgatggccgtgcagagactcgagatgtggttacagaatcctaagctgactcggccagca
caggatcttttgatgtctttgttcatgaactgtaatacacacggctcagacgacatggag
ttcatctcaaacctcatcaagatccgcctcaaacctaaagttctcctcagccactacatg
ctgtgtgtcagggagcttttgaatgctcaccgagataatttgggcactacggtgaagttt
gtgatttttaacgaactgtcaaatgccagaaatcccaataatatgcaagtgctccataca
gttctgcaacatagcccagagcaggcacccaagtttctggccatggtgttccaggacctg
ctgaccaataaggatgactacctccgggcctcacgcgccttgctcagggaaatcattaaa
cagaccaaacatgacaccaacttccagtctttctgtttaggcctcatgcaggagaggaaa
gaggccacttatgtggacatggagtttaaagagcgttttgtcatccaagtgacggatctc
ttgacagtgtccatgatgctggggatcacggctcaggtcaaagaggccggcatcgcctgg
gacaaaggagagaagaagaatctggaggcgctgaggtcctttcagaaccagattgctgcc
atccagagagatgctgtgtggtggctgcactccgtggttcccaccatcagtaaagtggca
cctaaagactatgtgcactgtctacacaaagtgctttttacagagcagcctgagacgtat
tacaaatgggacaactggccgcctgagagtgacagaaatttctttcttcggctgtgctca
gaggttcctctgttagaggacacgctgatacgcatcttggtgataggtctgtctcgtgat
ctgcccctgggcccagctgacgccatggagctggccgatcacctggtgaagagagctgcg
tgagttcagtctgacgacttggaagtgttgcgggtcgagaggatccaactcattgatgct
gtgctgaacctgtgcacttaccatcacccagagaacatccagctgcctgcaggctatcaa
cctccaaatctggccatatcaactctttactggaaggcctggctgctgctgcttgtggtc
gcagcgttcaacccacagaaaattggtttggcagcgtgggatggttaccccactctgaaa
atgctcatggagatggttatgacaaataactactcctatcctccctgcacggtggccgat
gaggagaccaaaactgagatgatcaacagagagctgcagatctctcagaaggagaggcag
gagatcctggcctttgagagccacctggcagccgcctccaccaagcagaccataacagag
aacaacagcctcctgctgtcccagctcacctgcctggacccaaagggcccccctcgtaga
ccaccacctcatgtcctggatcaactaaagagtctgaaccagtctctgcgtctgggccat
cttctgtgccgcagccgcaaccctgacttcctgctcaatattatccagagacaagcctct
tctcagtctatgccgtggctggctgatctcgtccagtccagtgaagggtccttggatgtg
ctgcccgttcagtgcctttgtgaattcctcctccacgatgctgctgatgaccgctcctcc
gctgctgatgaggaggaaggagagagtaaaaagcagcgagcaaagaaaagacagaggcag
cagaaacagaggcagcttcttggacggctccaggacctgctgctgggtcctaaggctgat
gaacagaccacatgtgaagttttggactacttcctgcgccgcctcagttcttctcaggtg
gcctctagggtgctggccatgaagggtttgtctctggtgctgactgagggagcattaaaa
gatgaagaggagagggatcagctcatggaggaggactccagagatgcagagttactgcca
ggctaccagtggctgcttcaggacctccccaaactacctctgtttgatagtgtaagaagc
ttgacgtccaacgccttacagcaggccattcacatggagactgatcctcagaccatcagc
gcatacctgatttacctttcccagcatgcaccagtggaggagcagtcactccacaatgac
ctggccttggatgtggctcgtctgataatggagcgctccactataatgaactgcctcttt
tccaagcactcctgcaggcccgagtctgatgccgttctctctgctcttatcttcatcttc
tccacctatatctgtcatatgaggaagacaaaagatggagaggacctctatagctggtcg
gagtctcaggatcaagtgttcctgcgtgggaccacaggagaaacggccaccatgcacatc
ctagtggtccatgctgtggtcatcctgctcacactgggacctcccaaaggggaaagtgag
ttttacacactgctggatatctggtttcctgataaaaagccccttcccactgcattcctg
gttgacacatctgaggaagcccttctgttgcctgattggctgaagttaagaatgatccga
tctgaagtctcccgattggtcgatgcagccctgcaggatctggagccccagcagctgctg
ttgttcgtccagtcctttgggatccccgtctccagcatgagcaaactgctacagtatctg
gaccaggccgtgtcccatgatcctcaaacactggagcagaacatcatggacaagaactac
atggctcatctagtggaggtccagcatgagagaggagccacaggtggacacatgtttcac
agtttactcagtgcttcacttcctctgcgcagagacagctcagaggtgagcagggctaag
gttactgtagaagcgccccatggctctgtgaagatgagagcagtgagtcaggtgcccgtg
atcggcccagaggatgatctcgctgggattctactacagctcttccctctgaaaatggat
cctcgctggcctccgcctccggtccggccattgtcattagctctgcagcagaccctggcc
caggaggtgctgcggacacgacagggtcacatccagcagggtggtgccgctgggcgtctc
ctacaagccttagcagcccttctaaactcagcccatgctggagccctggtcatggcaatg
caccacagccatacgatctcctgccctctactgcgccaactccatctttaccaggcacat
aatctacgtaacactactacacataaccttttccttgcagggccactccacagcctcctg
aaatctctggcagctcagtactctcacaaacatcgcgtcacatatgttcgtactggattt
ctgcacttggctgaagctctgccgtacagacgggactctgaagtggcagtgaggagcatt
attgcctctctgagagctggagaaaaatgcaacgctgaacctgaactcatacgaaaagtg
ttgcagggcctcatggaggtgaagtctccgtatctagaggagctgttgtccctgcttatg
accatcggtacaaagaccgggaccataggaaacacagcgggaccggttgccatggtgatc
tctctgctgcttcaggaaacagaggagcgaggggtgaaaatagaggtggattccaaaatt
gctgagtcaaagaagcctggctcgtgttcagggctgctggttgactggctggagctgctc
gaccctgaggtgacctctgtttgctcagatcttcagcagaagctgctttttgctcaaaac
aagcttcaaaacaaatgttgtgaaaaggatttaattgctaaaagtggtgtgagtgtggcc
ccctcctacaggccgtacctgttggccctcctcacacaccagtccaactggagcacctta
catcagtgcatcagctctctgctcaacaaacacagagaccagagactggacccaacctca
gcactagacttcttgtgggcctgcagtcacattccccgcatttggcaggggcgagatcag
aaaaccccccagaagcgcacggagcagtttgtgttgaagctgtcttctgaggagctcata
agcctggtggacctcatcctgtctgagtcagagctgagctgccgtgactcagccacctcc
aagagcgctttggaccaggtctcctgttctcttctccagtcacgcttgcccctcctgcac
agctgtctcaactcagacctggacaatgtcaagaaagtctctgagtacctcatcagctgt
gttaagaagtggggagacagtataatgagtaagaggtgtcagacgctgctgctgcagatc
tacctgcacttcccagaggtcatccaacacatccgcctaccagaggccaccctgagtgct
gagggggcagcagatggcagcacctgcaagctggatgttcttgtgcatcgtctcatcact
ctgctagctgacaccggagactccaaatcagctgagaaccttgcgtctgatgccaatctg
gcctgcaggaaactggccgtatctcaccctgtgcttctactcagacacctgcccatgatc
gctgcgctcctgcacggtcgcgtccatctgaacctgcaggagatcaggcagcagaaccat
ctgaccttcttcagcgatgtcctgtttgtcctggagctgctgcagccgctggttttccac
tctgaccaccagagggcactgcaggactgtttgctgtccttcatcaaagtactgcagaac
ttcaagagatcatcccgtatgcctatcataaacaaatttgtgcagttcatccaaaagtac
ataacccatgatgcagcatctgctgtgcctttccttcagaaacactcagatgtgctccaa
ggactatccactgagaatccggacctggtgcagctcaagtctttgctcgctggactgact
ctgcctgtgaagtctggttcctctgagagcgctgctgaggacagagacgctgaggattcg
tcctccagctccctccctctggtcaacatctcagcttccatgccgctgactgcggctgac
atgactaaatgtctgaagaagatctccaaaggagaagcaattgaggatgtgtttgagggg
ttgactgaagtggatgagaaatccaaaagaaatccagaaatcattcagtattttgttaat
gatcttcagaggttgatgagttcccctgaagaagtgtgccgcaacatggcgttcactctg
gccctgcggtgcaaccagaacatccccagtatggctgctgaattcctgccaaccttcatg
tactgtctgggcagcgggaactttgatgtagtgcagacggccttgagaaacttgcctgaa
tatgtgttgctctgtcaagaacatgcagatattcttctccatgaggcgtttttagtgggc
atctacggtcagattgacaccagctccatgattacagaatccatgaaggtcttgcgcatg
gaggcaaagacatag
DBGET
integrated database retrieval system
